KEGG   Buceros rhinoceros silvestris (rhinoceros hornbill): 104500512
Entry
104500512         CDS       T08612                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
brhi  Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:brhi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brhi01009]
    104500512 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brhi03036]
    104500512 (KDM5B)
Enzymes [BR:brhi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     104500512 (KDM5B)
Protein phosphatases and associated proteins [BR:brhi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104500512 (KDM5B)
Chromosome and associated proteins [BR:brhi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104500512 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 PHD_UBR7-like PHD_Pygo Exo70_N PHD_2 PHDvar_NSD zf-PHD-like Lipoprotein_20
Other DBs
NCBI-GeneID: 104500512
NCBI-ProteinID: XP_010142471
LinkDB
Position
Unknown
AA seq 1473 aa
DWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKIL
DLFQLNRLVAEEGGFDVVCKERKWTRIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSG
ASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRLRAEATNIKTESDPP
EARTHNLRRRMGCAPPKPENEKEMQSAVKLPEKKELTGEPPKDKSKGRSKKPANAVDLYV
CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFE
QAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIAS
KEFGSGFPVRGGKFKVRPDEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGM
CFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQ
LVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLG
RQCVEHYRLLNRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAVMIEEEKRLREKVDK
LGVTDSERVAFELFPDDERQCLKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYKYK
LGYRYTLEELYPMMNALKMRAESYNEWASNVNEALEAKINNKKSLLSFKALIEESEMKKF
PDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSGGGKCQNQLSVTELRLFVRQLYA
LPCALSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELR
IRLEQARWLEDVQLASSDHNSLTLDDMRRLIDLGVGLAPYPAVEKAMAKLQELLTVSEHW
DDKARNLIKARPRQSLSSLVAAVKEIEEIPAYLPNGVALKDAVQKARDWLQEVEALQVGG
RVPVLDTLAELVTRGRSIPVHLDYLPRLEALVAEVQAWKECAANTFLCENSPYSLLEVLC
PRCDIGMLNLKRKQKKLKEPVPSGKKKSTKLETLSDLERALSESKDTASAMATLGEARLK
EMEALRSLRAANEGKVLASEEDMELKVCLCQKEPAAPMIQCELCRGFFHTGCVSVPNVLQ
GPRVWLCPQCHRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLY
SGNLKLIQDKVGSGLLYSRWQGPAGQSPEANKVSQTIGAMSFSMPHDWDNRTIYLHSPFS
TGQHCIPLHVVSMELDELMMEAQLLQVSLPEIQELYQILFTKHSPGLQAEQRSPTGAAAE
KNECCRGKKDGMSYMERKLKRRFERESFCGEKRARVKKIRTPKKKKLKLNQSKDLGANKL
ERERLVEVQRSSDSHLLPSDMSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQ
WFHQVCVGISPEMAEKEDYICASCAGKDSPYRK
NT seq 4422 nt   +upstreamnt  +downstreamnt
gactggcagcctccatttgcatgtgatgtcgataagcttcactttactccgaggatccag
aggctcaatgaactggaggcccaaactcgtgtaaagctgaattttctggaccagattgca
aagttttgggagcttcaaggatgtacgctgaaaattccacacgtggagaggaaaatcttg
gatttatttcagcttaacagactagttgcagaagaaggaggattcgatgtagtttgcaag
gagagaaaatggaccagaatagccacgaggatgggatttgctcctggcaaagccgtgggt
tctcacatccgtgcacattacgagcgcattctctatccctataacttattccagtctgga
gcgagcctcttgtgcttgcagaaaccagatctcaccagtgacacaaaggacaaggagtat
aaaccccatgatattccacagagacagtcggttcagccgtcggaaacctgcccgccggct
cgtcgagcgaagcgcctgagagcagaggcaaccaatattaaaactgaatctgatcctcca
gaagccagaactcataatctgagacgtagaatgggatgtgctcctccgaagcctgaaaat
gaaaaggaaatgcagagtgcagtgaagcttccagagaagaaagaactcactggggagcca
ccaaaagacaaatccaaaggccgatctaaaaaacctgctaatgctgtggatttgtacgtg
tgtctcctgtgcggcagcggtaatgacgaggaccgtctcctgttgtgtgatggctgtgat
gacagttaccatactttctgtttaattccaccccttcatgacgttcccaaaggggactgg
aggtgtccccagtgtttggctcaggagtgtaataagcctcaagaagcgtttgggtttgag
caagcagcaagagactacacgcttcgcacatttggagaaatggcagatgccttcaagtcc
gactactttaacatgccagtacacatggtccccactgagctggttgaaaaagagttttgg
agacttgttagcaccattgaagaggatgtgacggtcgaatatggagctgatattgcttca
aaggaatttggcagtggcttcccagtgaggggtgggaaatttaaagttagaccagacgaa
gaggagtaccttgacagtggctggaatttgaacaacatgccagtgatggagcagtctgtt
cttgctcacatcactgcagacatttgtgggatgaaactaccctggctctatgtcggcatg
tgcttttcttcattttgttggcacatagaagaccactggagctattcgattaactatctg
cattggggggagcctaaaacgtggtatggagccccagggtatgcagctgaacagctggag
gatgtaatgaagaagcttgctccagagctctttgaatctcagccagatctcttgcaccaa
cttgtcaccataatgaacccgaatactttgatggcccacggagtgcctgtttatcgaacc
aatcagtgtgctggagagttcgtgatcacctttccaagagcttatcacagtggcttcaat
cagggtttcaattttgctgaagccgtgaacttctgcacggtcgattggctgccgctgggt
cgccagtgcgtggagcattaccgcctgctcaaccgctactgcgtgttctctcatgacgag
atgatctgtaagatggcttccaaagcggatgttcttgacgttgtggtggcatctacggtt
cagaaagacatggctgttatgattgaagaagagaagaggttgcgtgagaaggttgataaa
ctgggagtgactgactcggagagggtggcctttgagctgttccccgatgacgagcgtcag
tgcttgaagtgtaaaaccacctgcttcatgtccgctgtctattgtccatgtaaacctggg
ctgctggtttgcctgtaccacgtggaggatctctgttcctgtcccacctacaaatacaaa
ctggggtaccgctataccctggaggaactctacccaatgatgaacgcactaaagatgcgt
gcggaatcctacaacgaatgggcttccaatgtcaatgaagcgctggaggcaaaaattaac
aataaaaagagtctcctcagtttcaaggctttgatagaagaatcagaaatgaaaaagttc
ccggacaatgacctactgcgacacctccgtctggttacgcaggatgcggacaagtgtgcc
tcggttgcgcagcagcttctgaacggcaaaagacaaaccaggtaccgctccgggggaggg
aagtgtcaaaaccagctgagtgtgaccgaactgcggttgttcgtcaggcagctctacgct
ctgccctgtgccctcagccagacaccgttgctgaaggatcttcttgatcgtgtggaagct
tttcaacagcaaagccaaaaactcctttctgaagagatgcccagtgctgcagaacttcag
gagctgttggacgtcagcttcgactttgacgtcgatctgccccaactggctgaactgcgg
atccgtctggaacaggcacgctggctagaggatgtgcagctggcttcctcagaccacaac
tctctcactctagatgatatgagacgtcttatagacttaggtgttggactcgctccctac
ccggcagtggagaaggcgatggcaaagctgcaggagctgcttacagtctctgagcactgg
gatgacaaagccaggaatctcataaaggccagaccacggcagtccctgagcagtctggtt
gcagcggtgaaggaaatcgaggagatcccggcttacctcccaaacggcgtcgcgctgaag
gacgcggtgcagaaggccagagactggctncaggaggtggaagctctgcaggtgggagga
cgtgtgccggtactggacaccctggcggaactggtcacaagaggccgatcgattccggtg
cacctggactacctgccacggctggaggccttggtggcggaggttcaggcgtggaaggaa
tgcgcagccaacacctttctgtgcgagaactccccgtactctcttctggaggtgttatgt
ccccgctgtgacatcggaatgctgaacctgaagaggaagcagaagaagctgaaggagcca
gtgccgagtgggaagaagaaaagcaccaagctggagaccctgagtgacttggaacgagcc
ctctcggagagcaaagacactgcatctgcgatggctacgctcggggaagcccggttaaag
gagatggaagcattgcgttctctgcgagcagcaaatgaggggaaggtgctggctagcgaa
gaggacatggaactgaaagtctgcctgtgccagaaggagccggcagctcccatgatccag
tgtgagctctgcagagggttcttccacaccggctgtgtctcggtgcccaacgttttgcag
ggacctcgtgtgtggctctgtccacagtgtcaccggtcagaaaagccacctctagaaaag
atcctgccgttgctggcctccttgcagcgtatccgtgtgaggctcccagagggggatgcc
ttacggtatatgattgagagaactgtgaactggcagcacagagcacaacaaatgttatat
tcagggaatctaaaactcatacaagacaaagttggctcaggactcttgtacagcagatgg
caaggcccggcgggccagtcgccagaggcaaacaaggtttcccagacgattggagcgatg
tcgttctccatgcctcatgactgggataacagaaccatctatctccactctccgttttcg
acaggccagcactgcatcccgctgcatgttgttagcatggagctggatgagctgatgatg
gaggcccagctgctccaggtttctctgcctgaaatccaggagctctaccagatcctgttc
accaagcacagccctggcctgcaggcagagcagaggtcgcccaccggagccgcagccgag
aagaacgagtgttgccgaggcaaaaaggatgggatgagttacatggagaggaaactgaag
cggcgttttgagagagagagcttctgcggtgagaagagagcgagagtaaaaaaaataaga
acacccaaaaagaagaaactgaaactgaatcagtcgaaggatcttggcgctaacaaactg
gaacgggagcggctggtggaggtgcagcgctccagcgacagccacttgcttccctcagac
atgtcgttctctgagcaggaggactcggaggatgaagatgccatctgccctgctgtgaac
tgtctgcagcctgagggagacgaggtggactgggttcagtgcgacgggagctgcaaccag
tggttccaccaggtgtgcgtgggcatctctcccgagatggcggagaaggaggactacatc
tgcgccagctgcgcggggaaggactctccataccggaagtaa

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