KEGG   Buceros rhinoceros silvestris (rhinoceros hornbill): 104501160
Entry
104501160         CDS       T08612                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
brhi  Buceros rhinoceros silvestris (rhinoceros hornbill)
Brite
KEGG Orthology (KO) [BR:brhi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brhi03036]
    104501160 (KDM4B)
Enzymes [BR:brhi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     104501160 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     104501160 (KDM4B)
Chromosome and associated proteins [BR:brhi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104501160 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Bclx_interact DUF4537
Other DBs
NCBI-GeneID: 104501160
NCBI-ProteinID: XP_010143225
LinkDB
Position
Unknown
AA seq 1115 aa
MDPSPQNPGCKIMTFRPTLEEFRDFGKYIAYMESQGAHRAGLAKVIPPKEWKPRKTYDDI
DDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLERKYW
KNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFGMWK
TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKM
TLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKM
ATQCTCRKDMVKISMDVFVRILQPERYDLWKQGKDITVLDHMKPTALTSPELDAWNEMKP
ELKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAMETALEDVKVKEELKR
GPDLEDDERSKVMEGEGEGDCKVKVRPPKMKCERKKKHLFHQHQHHLPAPPTPLQQQPPL
PPPPAPQQQLLSEDQAPVARPPVPPAVPTSSTAEKSLPPAPLNIIQPSETPVEEDDFKPR
PIIPMLYVVPRTKKVVFDKERMSCQQAFEQFATQKSPSWREQMVPLEIAVKEEENAEAEN
REIAAEVSDLQTTSAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEE
DMSDPEALKSLLSLQWKNKAYNFPAERKFNAAAALSEPYCAVCTLFYPYNQTLQMDKEAV
PVSAGETTSFVHFSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCC
LQVHASCYGIRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDRRWVHIICAIAV
PEARFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAH
AAGVPMEPDDWPYVVSITCFKHKAANQNIQFRKEVTLGQTVITKNRNGLYYRCKVIGMTT
QTFYEVNFDDGSYSDNVYPESIISRDCVQMGPPLEGELVQLQWTDGIIYNAKFIAAQISQ
IYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRPAKRPRLG
NSRNPEEYGQNPDYLAFMESLLQTQYQSGTQSNMF
NT seq 3348 nt   +upstreamnt  +downstreamnt
atggacccaagtccgcagaaccctggctgtaagatcatgaccttccgtcccactttggag
gagttccgggactttgggaagtacatcgcgtacatggaatcgcagggggctcaccgagca
gggcttgccaaggtgattcctcccaaggaatggaagccccgaaaaacctatgacgacata
gatgacatggttatcccagctcccattcagcaggtggttactgggcagtcgggactgttc
acccagtacaacatacagaagaaaccgatgactgtgggagaataccggcgtctggctaac
agtgagaagtactgtactccacgccatcaagactttgaagacttggagcgcaagtactgg
aagaacctcacgtttgtctcaccgatttatggggccgatatcagtggctcactttatgat
gcagacgtggaagaatggaacattggcaatctgaacaccctcttggacatggtggaacat
gagtgtggcattatcatagaaggggtgaacaccccctacctctacttcgggatgtggaag
acaacatttgcctggcatacagaggacatggatctctacagtatcaactacttgcatttt
ggggagccaaagtcctggtatgccatacctccggaacacggcaagcgcttggaacgcctg
gcgaaagggttttttccaggaagctctcagggatgtgatgcgttcctccgtcacaagatg
accctcatttcgccctcaatcctgaagaaatacggcattccctttgaccggatcacccag
gaggctggagagttcatgattacctttccgtacggttaccacgctggcttcaatcacggc
ttcaactgtgccgagtccaccaacttcgccactttgcgctggattgactacgggaaaatg
gcaacccaatgcacttgccgcaaggacatggtgaagatttccatggatgtctttgtgagg
attctgcaaccagaacgttacgatttatggaaacaagggaaagatattactgtcctggac
cacatgaaacccacagctctgactagcccagaactcgatgcctggaatgagatgaaaccg
gagttgaaggctaaactgctccgcaggataggagatgaggaagaggacaacaaacaccgg
tctcacaggaaaaggagtcaacccagaagacataaaacagaggatcagaagtcccttggg
gacgtcatggctatggaaactgccttggaagatgtgaaagttaaagaggaactgaagaga
gggccagatctggaggacgacgagagaagcaaagtgatggagggagaaggtgagggtgac
tgcaaagtaaaggtccgtcctccgaaaatgaaatgtgagaggaagaagaagcaccttttc
catcaacaccagcatcatctgccagcacctccgacccctctgcagcagcagccaccacta
ccacctccacctgcgccccagcagcagctgctgtcagaggaccaggcgccagtggcacgg
ccaccagtgcccccagcagtacccacttcatcgacagcagagaagagcttgcccccagct
cccctgaacattatccagccctcggaaacaccggttgaggaagatgacttcaaacctcgg
cccatcattcccatgctttacgtggttccacggaccaaaaaggtggtgttcgacaaggag
cgcatgtcctgccagcaggccttcgagcagttcgccacgcagaagagtccgagctggcgg
gagcagatggtccctctggaaatcgcagtgaaggaggaggagaatgcagaagcagaaaat
agagagatcgctgcagaggtcagtgatttacagactacttctgctttttcaaaaatgaag
atggagataaagaagagtcgtcgtcatccactgggcaaaccaccaacccgctcccctctg
tcagtggttaagcaggagacctcgagcgatgaggaaacatttccattttctggagaggaa
gacatgagtgacccagaagctttgaaatctttactttccctccagtggaagaataaagcc
tataatttcccagcggaaagaaaattcaatgcagccgctgccctgagcgagccgtactgt
gctgtctgtaccctcttctacccgtacaaccagaccttgcagatggataaagaggctgtc
ccagtctccgcaggggagaccacctctttcgtccacttttctaagtgcggacagaagacc
aagcccctgatcccggagatgtgctttacctcaagtggagaaaacacggaaccccttcct
tcaaattcatacattggagaggatggaaccagccccttgatatcctgtgccaaatgctgc
ctgcaggttcatgctagctgttacggaatacgtccagacctggtgaatgaaagctggtct
tgctcacggtgctctgccaacgcgtgggcagcggaatgttgcctgtgtaatctcagggga
ggagctctccagatgaccactgacaggcggtgggtccatataatctgtgccatcgctgtc
ccagaggcccgttttctcaacgtgatggagcgtcatcctgtggatatcagcgctattcca
gagcagaggtggaaactgaaatgtgtgtactgccggaaacggatgaagaaggtgtctggt
gcctgcatccagtgctcctacgagcactgctccacgtccttccatgtgacctgcgcgcac
gcggccggcgtgcccatggagccggatgactggccctacgttgtgtccatcacctgcttc
aaacacaaagcagctaaccagaacattcagtttcggaaggaggtgacccttggacagact
gtgatcacaaagaaccggaatggactctactacagatgcaaagtgattggcatgaccaca
cagactttctatgaagtgaactttgacgacggttcatacagcgacaacgtttacccggaa
agcatcattagcagagactgcgtccagatgggaccccctctggagggggagttggttcag
ctgcaatggacagacggaatcatctacaacgccaagtttatcgcagcccagatcagtcag
atttaccaggtcgagtttgaagacggttctcagctaatggtgaagcgtggtgatatttat
accctggaggaagagcttcccaagagagtcaagtctcgcctgtccctcagcactggggcc
cctcaggaagatgtattttcgggagatgaagtcagaccagccaagcgtccccggctgggg
aattcaagaaatcccgaagaatacggacaaaaccctgattacttggcctttatggagagc
ctgttgcagacacagtaccagtctggaactcagagcaacatgttttag

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