Buceros rhinoceros silvestris (rhinoceros hornbill): 104501913
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Entry
104501913 CDS
T08612
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104501913 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brhi03021
]
104501913 (SF3B3)
03041 Spliceosome [BR:
brhi03041
]
104501913 (SF3B3)
03036 Chromosome and associated proteins [BR:
brhi03036
]
104501913 (SF3B3)
Transcription machinery [BR:
brhi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104501913 (SF3B3)
Spliceosome [BR:
brhi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104501913 (SF3B3)
Complex B
104501913 (SF3B3)
Complex C
U2 SnRNP specific factors
104501913 (SF3B3)
Chromosome and associated proteins [BR:
brhi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104501913 (SF3B3)
TFTC complex
104501913 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
104501913
NCBI-ProteinID:
XP_010144104
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTHAGEIPVDTWGIALKHLEKRAQEKNSLGEDSLSPREWSPAGLESRSQ
GSPSPLEMALGSLPALVQGQADTHFECPEAHPWVPKHTQAHPAREPGALGVLVEQSTPGS
LGVCSVVSQAPQGAGR
NT seq
4009 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctacaacttgacgttgcagcgtgccactggcattagcttcgctatccacggc
aatttctcgggaactaaacaacaagaaatcgttgtttcccggggtaagatcctggagcta
ctccgccccgatcccaacacggggaaggttcacacgctgctgacagtggaagtgtttgga
gtcatccgctccctcatggccttcaggctgacgggtgggaccaaagactacatcgtggtg
ggcagcgattcaggacgcatcgttattctggagtaccagccctcaaaaaatgtgtttgag
aagatccatcaggaaacctttggcaagagcggatgtcgcagaatcgttccaggccagtac
ttggctgtcgacccgaagggccgcgccgtcatgatcagtgctattgaaaagcagaagctg
gtgtatatcctgaacagagatgctgctgctcgcctcaccatttcctccccgctggaagct
cacaaggccaataccttggtctaccatgtggtgggagttgatgtggggtttgagaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggagaagcc
gctgccaacacacagcagacactgacattttatgaactggacttggggttgaaccacgtt
gttaggaagtacagtgagcctttggaagagcatggcaacttcctcataacggttcctggt
ggttctgatggacccagtggggttctgatctgctccgaaaactatattacttataaaaac
tttggtgaccagcctgatatcagatgcccaattcccaggagacggaatgatctggatgac
ccagagagaggtatgatttttgtctgctctgctacacataagaccaagtcgatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaatcactttggagaccgatgaagac
atggtaacagagattcgactgaagtactttgacaccgttcctgtcgctgctgccatgtgc
gtgctgaagacgggctttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagctcacctgggtgatgatgatgaggagccagagttctcttctgccatgcctctcgag
gaaggagatacattcttttttcagccacgacctctcaagaacctggtgctggtggatgag
ttggacagtttgtctcctattctgtgttgtcagatagctgatctggccaatgaagacaca
ccccagttgtatgtggcttgtggtcgggggccccggtcgtctctgagagttcttagacat
gggcttgaggtatccgaaatggccgtctcagagctgcctggtaaccccaatgcagtatgg
actgtgaggagacatgttgaagatgaattcgatgcctatatcattgtgtcctttgtaaac
gccacgctggtgctgtctatcggagagaccgtagaagaagtgactgactctggattcctg
ggtactacacccaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcacatcagagcagataagagggtaaatgaatggaagacaccaggg
aagaaaaccattgtcaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttacttcgagatggacccgtcaggacagctgaatgagtacacggagagg
aaggagatgtcagcagatgttgtctgcatgagcctggccaacgttccccctggggagcag
cgctctcggttcctggctgttgggctagtggacaacactgtcagaattatttcccttgac
ccttcggactgcctgcagcccctgagcatgcaggcccttcccgcgcagcctgagtcactg
tgcatcgtggagatgggcggcacagagaagcaggatgagctgggcgagaggggctctatt
ggctttctgtacctgaacatcgggctgcagaacggagtgctgctgcgaactgtcctggat
cccgttaccggcgatctctctgataccaggaccagataccttggttcacggcctgttaaa
ctcttccgagtccgaatgcaaggccaagaggcggtgctggccatgtcgagccgttcctgg
ctcagttactcctatcagtcacgcttccacctgactcccctgtcttatgagacactggag
tttgcatccggttttgcttccgagcagtgcccagagggtatcgtagccatctccacaaac
acactgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttcccg
ttacagtacacaccccgaaaatttgtcattcacccagagagcaataacctgatcatcatt
gagacagaccacaacgcttacaccgaagccaccaaggcgcagaggaagcagcagatggcc
gaggaaatggtggaggctgcaggcgaagacgagagggagttggctgcagaaatggctgca
gcctttctgaacgagaaccttcccgagtccatcttcggtgctcccaaggcagggaatggc
cagtgggcctctgttatcagggtgatgaaccctatccagggaaacacattagatctggtc
cagctagagcaaaatgaagctgccttcagtgtggctgtgtgccggttctccaatactggt
gatgagtggtatgtgctggtgggagtcgccaaggacctgattctgaaccctcgctcggtc
gctgggggatttgtctacacctacaaactggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcctgcagccattgctccattccaaggaagggtctta
attggagttgggaagctcttgcgtgtttatgacctgggcaagaagaaactgcttcggaag
tgtgagaataagcacattgccaactacatctgtggcatccaaaccattgggcacagagtg
atcgtctcagatgttcaggagagcttcatctgggtgcgctacaaaaggaatgagaaccag
ctaatcatctttgctgatgacacttatccccggtgggtcactaccgcaacgctcctggat
tatgataccgtggccggggcagacaaatttggcaacatctgcgtggtgaggttgcctccc
aacaccaacgatgaggtagatgaggatcccacaggcaacaaagccctctgggacaggggg
ctgcttaacggagcatcgcagaaggctgaagtaatcatgaattaccacgtgggagagacg
gtgctctccttacagaagaccacactcatcccaggaggctctgaatctcttgtctacacc
accttatcgggaggaataggaatcttggtcccgttcacttcccatgaggatcatgacttc
ttccagcacgtggaaatgcacttaaggtctgagcaccctcctctctgtggacgagaccat
ctcagtttccgctcctactacttccccgtgaagaacgtgatcgatggtgacctgtgtgag
cagttcaactccatggagcccaacaaacagaagaacgtggctgaggagctggaccgcacc
ccacccgaggtgtccaagaagctggaagacatccgcacgcatgcgggcgagatccccgtg
gacacctggggaatcgccctgaagcatcttgagaagagggcccaagaaaaaaactccttg
ggagaagactctttgagcccaagggagtggagtcctgctggcctggagagcaggagccag
ggatctcccagccccctggagatggctctgggcagcctccctgccctagtgcagggccag
gctgacacccactttgagtgccctgaagcacacccatgggtgcccaagcacacccaggca
cacccggccagggagcccggagccctgggggtgctggtggagcagagcaccccagggagc
ctgggggtgtgcagcgtggttagccaggccccccagggcgctgggcggg
DBGET
integrated database retrieval system
