Buceros rhinoceros silvestris (rhinoceros hornbill): 104502317
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Entry
104502317 CDS
T08612
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104502317 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brhi03032
]
104502317 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
brhi03400
]
104502317 (TOPBP1)
DNA replication proteins [BR:
brhi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104502317 (TOPBP1)
DNA repair and recombination proteins [BR:
brhi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104502317 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104502317
NCBI-ProteinID:
XP_010144579
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MKGSKEIFFVKFVKASGSSEYFRKALESIKEFQPEEHLQILEEEAALSIKENDKSLYICD
PFRGVVFNHLEKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMAMADVTVSCTSLEKDVR
EEVHKYVQMMGGRVHRDLSVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTLWDKSQQ
SMVRYTDVNVEDYTCPVFLGCTICVTGLSSSDRREVQRLAAEHGGQYMGQLTMNECTHLI
VQEPKGRKYECAKKWNVPCVSVRWFSDSIKKGFCQDETIYKVEAGSRPSHMPSTSTPTDH
ASKPDNHALSDVSHISNISSSGVNETASSSAMSSRLDPLPDELENLDISSFQAPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVILGDNNDELKHFLDKTAHRPHV
VTAKWLLESFSKGYLLPVERYIPLNYQPLENPVLEQPGMKSVLPKSNSLLKKEAAKVIKH
QEAAEDCFLSQYVNSDSTLDEVEKLTSRTFTDVTHLPVQGGNQSSTCDMPSVAEGGLFAT
KRFLLVGFGEEDKSCIADLIKENAGKVLPLQSRTIADYAVVPLLGCTVKATVGDVVTNTW
LTTCVEQQLLLDPQSNPLFTPVPAMEGVTPLEDCVLSFSQFTGAERDSLVYLAELLGARV
QEFFVRKANAKKGMFASTHLVVREPGGSKYEAAKKWNLPAVTAAWLLQSARRGERADESE
FLVEDAEAEDKESSVTQLSKTPATAKSPDSEQPTCLLEAGKNPPVTPLDISRFQSKAFHA
VISHHIGQTTPLAQGQLPQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETPRGPDQ
RMRKLSTPLSEVIGRNLKLALANSSRQAGAHSASPQLTPAQPEAEEEPKPLADVVIYVSK
KLSKRQSELNAVAASLGADYRWCFDETVTHFIYKGGQNDSNKEYKAVKERGIHIVSEHWL
LESAQEYKWLPESLFPHTYNPKMSLDISTVQDVELPSSSKLPSTGKPAEEDEIIPVDEDD
AEDDVTTDQIKESVTTEEEQTVTSDSKGVLTQALEMRENFQRQLQEIMSATSLVKPPGQR
GSLSRNGLDGSPVTPHSTRPVRNSRSRVLEARRQSHQALADVNTEPSQSEQIIWDDPTAR
EERARLVSNFQWPDSPSQYTEQGQSNTSKNVEESVFRGPSADAEIAGMAVPEAGDGDLTA
CVKNPVRRDPEVLVKDHLIPTPQAPSIAFPLANPPVAPQPGEKAVMEDEKAEEEPEKHRK
FQLSSLNPQERFDYCHLIEELGGTVLEKQCFDPSCTHIVVGHPLRNEKFLASMAAGKWVL
HRSYLEACRGAGCFVQEEDYEWGSNSILNVLPGINVNQKKLALAAMRWRKKIHKGRQETG
IAEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVLPGHAVSLFKEATHLFADFSKLKPDD
PRVNVAEAAAQGVRCLKPEYIADYLIQDPPPPVESYCLPEAGSHLWSNRELGPGLSQKRK
ARGETSGVKRSRVH
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggagtaaggagatcttctttgtgaaattcgtaaaggcctccgggagctcggag
tatttccgtaaagctcttgagtctataaaagaatttcagccagaagaacatctccagatc
cttgaagaagaagcagcgctcagcataaaagaaaatgacaagtcgctttacatttgtgac
ccttttagaggagttgttttcaatcatctcgaaaagctcggctgcaggattgtcgggccg
caggtggtcctgtactgtatgcagtcccagcgctgtgtcccgagagccgagtatccagtg
tacaacatggccatggccgacgtgacggtgtcctgcaccagcctggagaaagacgtcagg
gaagaagttcataagtacgtgcagatgatgggcggacgtgtgcacagagacctcagcgtg
tcagtaactcaccttatagctggagaggttggcagcaagaagtacttggtagctgcttct
ctgaaaaaacctatcttgcttccctcttgggtcaagactctgtgggataagtctcagcaa
agcatggtgaggtacacggacgttaacgtggaggactacacctgccccgtgttcctcggc
tgtaccatctgtgtgacaggtttgagcagttcggacaggagggaggtgcagcgcctcgct
gccgagcacggtggccagtacatggggcagcttacgatgaacgagtgcactcacctcatc
gtccaggagccaaaaggtcggaagtacgaatgtgccaaaaaatggaacgtgccctgcgtg
tccgtgcggtggttttctgacagcattaagaaaggcttctgccaggatgagacaatatat
aaagtagaggctggatcaagaccgagtcatatgcccagcacatcaacacctacagatcac
gccagcaagcccgataatcacgccctgtcggacgtcagccacatctccaatatcagttcg
agtggcgttaatgaaaccgcgagtagttctgccatgagcagcaggctggatccccttccc
gacgagctggagaacctggatatcagttcttttcaagccccggaagatctgttagatggg
tgtcgaatctacctgtgtggcttcagtggcaggaagctggacaagatgagaaggcttatt
aattgcggtggtggtgttcggtttaatcagcttaatgaagatgttacccatgtcattttg
ggggacaataatgacgagctgaaacactttttggacaagacagctcacaggcctcacgta
gtgacagcaaagtggttgctggagtcatttagtaaaggttatctactcccagtggagaga
tacatccctctgaactaccagccactagagaaccccgttttggagcaaccgggaatgaag
tcagttcttcccaaaagtaacagtctcctgaagaaggaagctgcgaaggttataaagcac
caggaagccgctgaagattgttttctctcacagtacgtcaacagtgattctacattagat
gaagttgaaaaactaacatccagaaccttcaccgatgtgactcacttgcccgttcaagga
gggaatcaatcttccacctgtgacatgccctcggtggctgagggaggcttgtttgccacg
aagaggtttcttctcgtgggtttcggtgaagaggacaagtcctgcattgcagatctcatc
aaggagaacgctgggaaggtcctgccgctgcagagcagaaccatcgcagactacgccgtg
gtgcctttactggggtgcacggtgaaggcgacggttggtgatgttgtcacaaacacgtgg
ctgacaacatgtgtggaacagcagcttcttttagacccccagtccaacccactcttcacc
cctgtcccggcaatggaaggagtcacccctctggaggattgtgttctttcttttagccag
ttcaccggtgcagaaagagactccctggtttatctggccgagctgctgggagctagggtc
caagaattctttgtgcggaaagccaacgcaaaaaaagggatgtttgccagcacccatctc
gtggtgagagagccggggggttccaagtacgaagctgcgaagaagtggaacttgccggca
gtgactgcagcttggctcctgcagtccgcgaggaggggagagagagcagacgagagtgag
ttcctggtggaagacgcagaggctgaagataaggagagttctgttactcagcttagcaag
acaccagcaactgctaaatctcctgattcagaacaacccacttgcctcctcgaagctgga
aaaaacccacctgtgacccctcttgatatcagcaggttccagagtaaagctttccacgct
gtcatctcccatcacattgggcagacaacacctcttgcacaagggcaactgccccagaaa
gaaccctctttgcatcttgatacaccgtcaaaatttctctccaaagacaagctattcaag
ccttcattcgatgtcaaggatgctctggcagctttggaaactccacgaggtcccgatcaa
agaatgaggaaactgagcacccctctctctgaggtcatcggcaggaacttgaagctggcg
ctggcaaacagctcaaggcaggcgggagctcacagcgccagccctcagctgacacctgcg
cagccggaagcggaagaagagcccaagcctctggccgatgttgtgatctatgttagtaaa
aagcttagcaagaggcagagcgagctgaacgctgtagcagcttcccttggggcagactac
agatggtgctttgatgagacggtgacacacttcatctacaaggggggacaaaacgacagc
aataaggagtacaaagccgttaaggaacggggcatacatattgtttcggagcactggctt
ttggagagtgcccaagaatataaatggctccccgagtctctctttcctcacacgtacaat
cccaaaatgagcctggacatcagcacggtgcaagatgtcgagctcccctcctccagcaaa
cttccgtcaaccgggaaaccagcagaggaggacgagattattccagtggacgaagatgat
gctgaagatgatgtaactactgaccaaataaaggaatcggtcactacagaggaagaacaa
actgtaacgagtgactccaaaggagttttaacccaagccctagaaatgagggagaacttc
caaaggcagctgcaggagatcatgtctgccacatcactggtgaaacccccggggcaaaga
ggctccctctcaaggaacggtttggacgggtctccagtcacgccccacagcacacgccct
gtgcgaaacagccgcagcagggtcttggaagcccgaaggcagtcccaccaggcactcgca
gacgtaaacacggagccatcccagagcgagcagatcatctgggacgatcccaccgcgagg
gaggagagagcaagacttgtcagcaactttcagtggccagacagtccttcccagtacacg
gagcaaggtcagagtaacaccagcaagaacgtggaggagtctgtcttcagaggaccctca
gctgatgcagagattgctggtatggctgttcctgaggccggagatggagatttgactgca
tgcgtgaagaatcctgtacgcagagatccagaagtgctggtgaaagatcacttgatcccc
accccgcaggcccccagcattgctttcccgctggctaaccctcctgtggcaccacagccc
ggagaaaaggctgttatggaagatgagaaggctgaggaagaaccagaaaaacaccgtaaa
tttcagctgtcgtcccttaatcctcaagaacgatttgattattgccatctgattgaggaa
ttaggtggaacagtacttgagaagcagtgctttgatccgagctgcacgcacatcgttgtg
ggacaccctcttcggaatgaaaaattcttggcttcgatggcagctgggaagtgggtgctg
catcgttcctacctggaggcgtgtagaggagctggctgcttcgttcaggaagaagattac
gagtggggaagtaattccatacttaatgttttgcctggaatcaacgtaaaccagaagaaa
ctagcgcttgcagccatgaggtggaggaaaaaaattcataaggggaggcaagagacgggc
atcgctgagggagctttcagcggctggaaagtgatcctgaacgttgatcaaaccaaggaa
gcgggattcaggcgccttctgcagtcgggaggagcaaaagtgttgcctggccatgctgtg
tctctctttaaagaagcgactcacctcttcgccgatttcagcaagctgaagccggacgac
cccagggtgaacgtggcagaggcggcggcccaaggagtgcgctgcctcaagccggagtac
atcgccgactacctcatccaggacccccctcccccagtggagtcctactgcctgcctgaa
gctggatcccacctttggagtaacagggaacttggacctgggttatcccagaaaagaaaa
gcacggggagagacaagcggagtgaagcggtcccgagtacactga
DBGET
integrated database retrieval system
