Buceros rhinoceros silvestris (rhinoceros hornbill): 104502407
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Entry
104502407 CDS
T08612
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
brhi
Buceros rhinoceros silvestris (rhinoceros hornbill)
Pathway
brhi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brhi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104502407 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brhi03041
]
104502407 (DDX46)
Enzymes [BR:
brhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104502407 (DDX46)
Spliceosome [BR:
brhi03041
]
Complex A
U2 snRNP components
U2 related factors
104502407 (DDX46)
Complex B
104502407 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104502407
NCBI-ProteinID:
XP_010144678
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
HYRKRSASRGRSGSRSRSRSPSDKRGKREDRRSRSRDRERRRERSRSRDKRRSRSRDRKR
QRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEKTDGVE
VSKDKKKDDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQRKKAMENIG
ELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVKKFN
MRSVKGGGSEKKSGPTVTKVVTVVTTKKAAAAEKKKGELMENDQDAMEYSSEEEEVDLQT
ALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLELEGITVKGK
GCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTGSGKTIA
FLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGI
SEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR
IVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEEKK
FLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDF
KNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE
DQARYAGDIIKALELSGNXXXADLEKLWADFKDQQKAEGKLIKKSSGFSGKGFKFDETEQ
ALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMGTPGTSNAPTPSAGN
AEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVSAKTIA
EQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQR
ISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQ
NSYQPTNKGRYKVL
NT seq
3106 nt
NT seq
+upstream
nt +downstream
nt
gcactatcggaagcgctctgcgtcacgtggacgctctggtagccgttctaggagtcgttc
tccatccgacaaaagaggaaaacgtgaagacagacgctccaggagcagagatcgagaacg
tagacgtgagaggtcgcgcagtagggacaagaggaggtcgcgatcccgtgacagaaagcg
tcaaagacgttccaggagcagagaaagggagcggagccgagagagacgaagatcgcggag
ccgagagaggaggcgctctagaagcaggagtagagggagacggtctcgatcctccagtcc
aagcaagaacaggaaaactgaaaacagatcaagatctaaagaaaagacggatggtgtgga
agtttccaaagacaagaaaaaagacgacaaagaagaggagaaggataaagatgctaccac
aaacactgtggccactgagaattttgatcagaacaaactagaagaagaaatgagaaaacg
aaaggagagagtggagaaatggagggaagagcaacgcaagaaggctatggaaaacatagg
agaactgaaaaaagaaatcgaggagatgaaacaggggaaaaaatggagtttagaagacga
cgacgatgatgaagaggagactgcagaaggagaaaaagaaggcaatgaggttgaagatga
agagttagatcctttggatgcttatatggaagaagtgaaagaagaggttaagaagttcaa
tatgaggagtgtgaaaggtggagggagtgaaaagaaatccggaccaactgttaccaaagt
agtaactgtggtgacaaccaagaaagcagctgcagcagagaagaagaagggggagctcat
ggagaatgaccaggacgcgatggagtattcctcagaagaggaggaagttgatcttcagac
tgccctgaccggctatcagaccaagcagagaaagctgctagaaccagtggatcacggaaa
gatagagtatgaacccttcaggaaaaacttctatgttgaagtaccagaactagctaaaat
gactcaagaagaggtgaacgtgtacaggctggagttggagggaattacggtcaagggaaa
aggctgccccaaaccaataaaaacctgggtacagtgtggtatttccatgaagattctcac
tgccctcaaaaaacacggctatgaaaagcccactcccattcagacccaggccatcccagc
gattatgaatggacgtgacttgattggcattgctaaaacaggaagcgggaagactattgc
gtttctattgcccatgttcagacacatcatggatcagagagccttagaagaaggagaagg
tcccatagccgtcattatgacacctacacgcgagctggctctgcagatcaccaaggagtg
taagaaattctccaagactcttggccttcgggttgtctgtgtttatggaggaacaggcat
cagtgaacagatagctgaactcaaaagaggtgctgaaattattgtttgcacaccgggacg
tatgattgacatgttagcagctaacaatggtcgggtgacaaacctccgcagagtcacgta
cgttgtactcgatgaagcagacagaatgttcgacatgggttttgagcctcaggttatgcg
cattgtagacaacgtcaggcctgaccgtcagactgtcatgttctctgctacttttcccag
agctatggaggcattagctcggcgaatcctaagtaaacctatagaagtgcaggttggagg
caggagtgtcgtctgttccgatgtggagcaacatgttattgtcatagaagaggagaaaaa
gtttttgaagttactggagctactgggacactatcaggagaaaggatcagttatcatatt
tgtagataaacaagaacacgctgacgggctgctgaaagatttaatgagagcctcttaccc
ttgcttgtcccttcatgggggtattgaccagtatgacagggacagcataatcaatgattt
caagaacggaatttgcaaactgctggtggccacatcggtagcagcaagaggcttggatgt
aaaacagttgatgttggtggtcaattacagctgtcccaaccattatgaagattatgtgca
ccgagcaggtcgaactggacgagctggcaataaagggtatgcatacacgttcattactga
ggaccaggcccggtatgctggggatatcattaaggctttggaattgtccgggaatnnnnn
nnntgctgatttggagaagctctgggctgacttcaaagaccaacaaaaggctgagggaaa
gctgattaaaaaaagcagtggattctctggcaaagggtttaaatttgacgaaacagaaca
ggctttggctaacgaaaggaagaagctacaaaaagcagctcttggcttgcaagattcaga
tgatgaagatacagctgtcgatattgatgagcaaattgaaagcatgttcaattcaaagaa
gagggtaaaagacatgggaacaccaggaacatcaaatgctcctacaccgtcagctgggaa
tgcagaaaaattggaaattgctaaaaggttggctttgagaatcaatgcccagaagaatct
tggagcagaggcacaagtattggtccccttccacttcaaggatgtgatgcagcaggctac
aaacgctatcctgagaggaggcacgattcaagctccgactgtgtctgccaagaccattgc
agagcagctggctgagaaaatcaatgctaagctcaattatgtgcccatagagaagcagga
ggaagagaaacaggatggaggacaaaatgaatcctttaagagatatgaagaggaattgga
gatcaatgacttcccacagactgccagatggaaggtcacctccaaagaagcgctgcagag
aatcagtgaatactctgaagctgctattaccatcagaggaacttacttccctccaggcaa
agaacccaaggagggagaacggaagatttatttggctatagaaagtgccaatgaactggc
tgtgcagaaagcaaaggcagaaatcacgcgacttataaaagaggagctcatcagattgca
aaattcctaccaaccaaccaacaaaggaagatacaaagttttatga
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integrated database retrieval system
