KEGG   Brevibacterium sp. CS2: FDF13_00500
Entry
FDF13_00500       CDS       T05958                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bri  Brevibacterium sp. CS2
Pathway
bri03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FDF13_00500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bri03021]
    FDF13_00500
   03400 DNA repair and recombination proteins [BR:bri03400]
    FDF13_00500
Enzymes [BR:bri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FDF13_00500
Transcription machinery [BR:bri03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FDF13_00500
DNA repair and recombination proteins [BR:bri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FDF13_00500
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: QCP03982
UniProt: A0A4P8H9E6
LinkDB
Position
complement(95515..99387)
AA seq 1290 aa
MPDVNFFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYMITWVDEDSRHRDLPTLQNQIDVEKKQLVDRRDADIDRRARKLEED
LAALEAEGGTAQAKKKLRDQAEREMANLRKHSERDIDRIEKVWDRFKNLAVSDLEGDESL
YREMVERFGIYFSGAMGAEAIQKRLQDFDLEAESDALRELIKTGKGQRKTRALKRLKVVN
AFLTTDNTPEGMVLDAIPVIPPEPRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKTMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQH
PQVWDVLEEAITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSANNILKPSDGKPVTMPSQDMIIGIYHLTSERSGAEGTGR
EFSSIAEAIMAFDRGELDLGAKIRVRIDDIVPNESMTMPEGWEPGTPAVVETTLGRALFN
ETLPSDYRFIDATVDKKMLSKIVNRLADFYPKVEVAATLDNFKATGFYWATRSGLTVAMS
DIVSPDAKEGMLAKAEDLAAKVQEQYDFGALTDDERRNELVKIWSETTDEVDDAMQKNFP
ENNSVLRLVESGASGNWTQVRQLAGMRGLVTNPKGEIIPRPIKSNYREGLSVLEYFIASH
GARKGLADTALRTADSGYLTRRLVDVSQDVIVRTEDTDTTKGLTLPIAQEGPTGELEVHE
FAETSVHGRLTVSDITDSDGTVLYPAKTDVTVEVVENLVAHGIREIKVHSVLTADSDVQI
SAVHYGRSMATGQLVDIGEAIGTVAAQSIGEPGTQLTMRTFHTGGVAAGGGGDITQGLPR
VTELFEARTPKGFAPIAEATGRVKIDDSRKTRYVIIVPDDGAEEIEHAVGRRSQLLVEDG
QHITAGEKLVQGAVDPKQVLRIRGRREAERFLVDEVQKVYRSQGVGIHDKHIEVIVRQML
RRVTVIESGDTTLLPGELVDRGRYQAENRRIVAEGGTPASARDELMGITKASLATESWLS
AASFQETTRVLTEAALEGKSDPLLGLKENVILGKLIPAGTGMHKFRDMVVEPTEEAKQEM
FSNSYGDFYPSLTGEGAAIPLEDYDFGAFS
NT seq 3873 nt   +upstreamnt  +downstreamnt
gtgcctgacgtcaatttcttcgatgagctgcggatcggcctggccactgccgacgacatc
cgccgctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
ccggagaaggacggcctgttctgcgagaagatcttcggaccgacccgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggggtc
gaggtcacgcgggccaaggtccgccgtgagcggatgggccacatcgagctcgccgcgccg
gtcacccacatctggtacttcaagggtgtgccctcccgcctgggctacctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcgtacatgatcacctgggtcgac
gaggactcccggcaccgggacctgccgaccctgcagaaccagatcgacgtggagaagaag
cagctcgtcgaccgtcgcgacgccgacatcgaccggcgtgcccggaagctcgaggaggac
ctcgccgcgctcgaggccgagggcggcaccgcccaggccaagaagaagctccgcgaccag
gcggagcgcgagatggcgaacctccgcaagcactccgagcgcgacatcgaccgcatcgag
aaggtctgggaccggttcaagaacctcgccgtgtccgacctcgagggcgacgagtcgctc
taccgcgagatggtcgagcgcttcggcatctacttctccggcgcgatgggcgccgaggcg
atccagaagcggctccaggacttcgacctggaggcggagtcggatgcgctgcgcgagctc
atcaagaccggcaaggggcagcgcaagacccgggcactcaagcgcctcaaggtcgtcaac
gcgttcctcaccaccgacaacacccctgagggcatggtcctcgacgcgatcccggtgatc
ccgccggagccccgcccgatggtgcagctcgacggcggccggttcgcgacctcggacctc
aacgacctctaccgtcgggtgatcaaccgcaacaaccggctcaagcgcctgctcgacctc
ggcgccccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgactcg
ctgttcgacaacggccgccgcggccgtccggtcaccgggccgggcaatcgcccgctcaag
tcgctgtcggacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgctcggtcatcgtcgtcggcccgaccctcaagctccaccag
tgcggtctgcccaagacgatggcgctcgagctgttcaagcccttcgtcatgaagcggctc
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcgcatggtcgagcgccagcat
ccgcaggtgtgggacgtcctcgaagaggcgatcaccgagcacccggtgctgctcaaccgc
gcaccgaccctgcaccgcctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtgtgctcggcgttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcgtgctcatgctg
tcggcgaacaacatcctcaagccctccgacggcaagccggtcaccatgcccagccaggac
atgatcatcggcatctaccacctgacgagcgagcggtcgggcgccgagggcaccggacgc
gagttctcctcgatcgccgaggccatcatggccttcgaccgcggcgagctcgacctcggg
gcgaagatccgcgtgcggatcgacgacatcgtcccgaacgagtcgatgaccatgcccgag
ggctgggagccgggcacgccggccgtcgtcgagacgacgctgggtcgcgcgctgttcaac
gagacgctgccgtcggactatcgcttcatcgacgccaccgtcgacaagaagatgctgtcg
aagatcgtcaaccggctcgccgacttctaccccaaggtcgaggtcgccgcgacgctcgac
aacttcaaggccaccggcttctactgggccacccgctcgggtctgacggtcgcgatgtcc
gacatcgtgtccccggacgccaaggagggcatgctcgccaaggcggaggacctcgcggcc
aaggtgcaggagcagtacgacttcggtgctctgacggacgacgagcgccgcaacgagctc
gtcaagatctggtcggagaccaccgacgaggtcgatgatgcgatgcagaagaacttcccg
gagaacaactccgtgctgcgcctcgtcgagtccggcgcctcgggcaactggacgcaggtc
cggcagctcgcgggtatgcgaggcctggtgacgaaccccaagggtgagatcatcccgcgt
ccgatcaagtcgaactaccgcgagggcctgtcggtgctcgagtacttcatcgcgagccac
ggagcccgcaagggactcgccgacaccgcgttgcggacggcggactcgggctacctcacc
cgtcgcctcgtcgacgtgtcccaggacgtcatcgtgcgcaccgaggacaccgacacgacg
aagggcctcaccctgccgatcgcgcaggaggggccgaccggggagctcgaggtccacgag
ttcgcggagacgagcgtgcacggccgcctcacggtgtccgacatcaccgactccgacggc
accgtgctgtacccggcgaagaccgatgtcaccgtcgaggtcgtcgagaacctcgtcgcc
cacggcatccgtgagatcaaggtgcactccgtgctcaccgccgactccgacgtgcagatc
tcggccgtccactacggacggtcgatggccaccggccagctcgtcgacatcggcgaggcg
atcggcacggtcgcggcgcagtcgatcggcgagcccggcacccagctgacgatgcgcacc
ttccacaccggtggcgtggccgccggcggcggaggagacatcacgcagggtctgccgcgt
gtgaccgagctgttcgaggcgcgcacgcccaagggattcgcgccgatcgccgaggccacc
ggccgggtcaagatcgatgactcgcgcaagacgcgctacgtcatcatcgtgcccgacgac
ggggccgaggagatcgagcacgccgtgggccgccgctcgcagctgctcgtcgaggacggc
cagcacatcaccgccggtgagaagctcgtccagggcgctgtcgaccccaagcaggtgctc
cgcatccgcggtcgccgggaggccgagcgcttcctcgtcgacgaggtgcagaaggtgtac
cgctcgcagggcgtgggcatccacgacaagcacatcgaggtcatcgtgcgccagatgctc
cggcgcgtcaccgtcatcgagtccggcgacacgacgctgctgcccggcgagctcgtggac
cgcgggcggtaccaggcggagaaccggcggatcgtcgccgagggcggcacccccgcctcg
gcccgcgacgagctcatgggcatcaccaaggcctcgctcgcgaccgagtcgtggctgtcg
gcggcctccttccaggagaccacccgtgtgctcaccgaggcggccctcgagggcaagtcg
gatccgctgctcggcctcaaggagaacgtcatcctcggtaagctcatcccggccggaacc
ggaatgcacaagttccgcgacatggtcgtcgagcccaccgaggaggccaagcaggagatg
ttcagcaactcctacggcgacttctacccgagcctgaccggggagggtgcggccatcccg
ctcgaggactacgacttcggagcgttcagctga

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