Entry |
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Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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KO |
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Organism |
bri Brevibacterium sp. CS2
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:bri00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FDF13_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bri03021]
FDF13_00500
03400 DNA repair and recombination proteins [BR:bri03400]
FDF13_00500
Enzymes [BR:bri01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FDF13_00500
Transcription machinery [BR:bri03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FDF13_00500
DNA repair and recombination proteins [BR:bri03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FDF13_00500
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(95515..99387)
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AA seq |
1290 aa
MPDVNFFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYMITWVDEDSRHRDLPTLQNQIDVEKKQLVDRRDADIDRRARKLEED
LAALEAEGGTAQAKKKLRDQAEREMANLRKHSERDIDRIEKVWDRFKNLAVSDLEGDESL
YREMVERFGIYFSGAMGAEAIQKRLQDFDLEAESDALRELIKTGKGQRKTRALKRLKVVN
AFLTTDNTPEGMVLDAIPVIPPEPRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKTMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQH
PQVWDVLEEAITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSANNILKPSDGKPVTMPSQDMIIGIYHLTSERSGAEGTGR
EFSSIAEAIMAFDRGELDLGAKIRVRIDDIVPNESMTMPEGWEPGTPAVVETTLGRALFN
ETLPSDYRFIDATVDKKMLSKIVNRLADFYPKVEVAATLDNFKATGFYWATRSGLTVAMS
DIVSPDAKEGMLAKAEDLAAKVQEQYDFGALTDDERRNELVKIWSETTDEVDDAMQKNFP
ENNSVLRLVESGASGNWTQVRQLAGMRGLVTNPKGEIIPRPIKSNYREGLSVLEYFIASH
GARKGLADTALRTADSGYLTRRLVDVSQDVIVRTEDTDTTKGLTLPIAQEGPTGELEVHE
FAETSVHGRLTVSDITDSDGTVLYPAKTDVTVEVVENLVAHGIREIKVHSVLTADSDVQI
SAVHYGRSMATGQLVDIGEAIGTVAAQSIGEPGTQLTMRTFHTGGVAAGGGGDITQGLPR
VTELFEARTPKGFAPIAEATGRVKIDDSRKTRYVIIVPDDGAEEIEHAVGRRSQLLVEDG
QHITAGEKLVQGAVDPKQVLRIRGRREAERFLVDEVQKVYRSQGVGIHDKHIEVIVRQML
RRVTVIESGDTTLLPGELVDRGRYQAENRRIVAEGGTPASARDELMGITKASLATESWLS
AASFQETTRVLTEAALEGKSDPLLGLKENVILGKLIPAGTGMHKFRDMVVEPTEEAKQEM
FSNSYGDFYPSLTGEGAAIPLEDYDFGAFS |
NT seq |
3873 nt +upstreamnt +downstreamnt
gtgcctgacgtcaatttcttcgatgagctgcggatcggcctggccactgccgacgacatc
cgccgctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
ccggagaaggacggcctgttctgcgagaagatcttcggaccgacccgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggggtc
gaggtcacgcgggccaaggtccgccgtgagcggatgggccacatcgagctcgccgcgccg
gtcacccacatctggtacttcaagggtgtgccctcccgcctgggctacctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcgtacatgatcacctgggtcgac
gaggactcccggcaccgggacctgccgaccctgcagaaccagatcgacgtggagaagaag
cagctcgtcgaccgtcgcgacgccgacatcgaccggcgtgcccggaagctcgaggaggac
ctcgccgcgctcgaggccgagggcggcaccgcccaggccaagaagaagctccgcgaccag
gcggagcgcgagatggcgaacctccgcaagcactccgagcgcgacatcgaccgcatcgag
aaggtctgggaccggttcaagaacctcgccgtgtccgacctcgagggcgacgagtcgctc
taccgcgagatggtcgagcgcttcggcatctacttctccggcgcgatgggcgccgaggcg
atccagaagcggctccaggacttcgacctggaggcggagtcggatgcgctgcgcgagctc
atcaagaccggcaaggggcagcgcaagacccgggcactcaagcgcctcaaggtcgtcaac
gcgttcctcaccaccgacaacacccctgagggcatggtcctcgacgcgatcccggtgatc
ccgccggagccccgcccgatggtgcagctcgacggcggccggttcgcgacctcggacctc
aacgacctctaccgtcgggtgatcaaccgcaacaaccggctcaagcgcctgctcgacctc
ggcgccccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgactcg
ctgttcgacaacggccgccgcggccgtccggtcaccgggccgggcaatcgcccgctcaag
tcgctgtcggacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgctcggtcatcgtcgtcggcccgaccctcaagctccaccag
tgcggtctgcccaagacgatggcgctcgagctgttcaagcccttcgtcatgaagcggctc
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcgcatggtcgagcgccagcat
ccgcaggtgtgggacgtcctcgaagaggcgatcaccgagcacccggtgctgctcaaccgc
gcaccgaccctgcaccgcctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtgtgctcggcgttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcgtgctcatgctg
tcggcgaacaacatcctcaagccctccgacggcaagccggtcaccatgcccagccaggac
atgatcatcggcatctaccacctgacgagcgagcggtcgggcgccgagggcaccggacgc
gagttctcctcgatcgccgaggccatcatggccttcgaccgcggcgagctcgacctcggg
gcgaagatccgcgtgcggatcgacgacatcgtcccgaacgagtcgatgaccatgcccgag
ggctgggagccgggcacgccggccgtcgtcgagacgacgctgggtcgcgcgctgttcaac
gagacgctgccgtcggactatcgcttcatcgacgccaccgtcgacaagaagatgctgtcg
aagatcgtcaaccggctcgccgacttctaccccaaggtcgaggtcgccgcgacgctcgac
aacttcaaggccaccggcttctactgggccacccgctcgggtctgacggtcgcgatgtcc
gacatcgtgtccccggacgccaaggagggcatgctcgccaaggcggaggacctcgcggcc
aaggtgcaggagcagtacgacttcggtgctctgacggacgacgagcgccgcaacgagctc
gtcaagatctggtcggagaccaccgacgaggtcgatgatgcgatgcagaagaacttcccg
gagaacaactccgtgctgcgcctcgtcgagtccggcgcctcgggcaactggacgcaggtc
cggcagctcgcgggtatgcgaggcctggtgacgaaccccaagggtgagatcatcccgcgt
ccgatcaagtcgaactaccgcgagggcctgtcggtgctcgagtacttcatcgcgagccac
ggagcccgcaagggactcgccgacaccgcgttgcggacggcggactcgggctacctcacc
cgtcgcctcgtcgacgtgtcccaggacgtcatcgtgcgcaccgaggacaccgacacgacg
aagggcctcaccctgccgatcgcgcaggaggggccgaccggggagctcgaggtccacgag
ttcgcggagacgagcgtgcacggccgcctcacggtgtccgacatcaccgactccgacggc
accgtgctgtacccggcgaagaccgatgtcaccgtcgaggtcgtcgagaacctcgtcgcc
cacggcatccgtgagatcaaggtgcactccgtgctcaccgccgactccgacgtgcagatc
tcggccgtccactacggacggtcgatggccaccggccagctcgtcgacatcggcgaggcg
atcggcacggtcgcggcgcagtcgatcggcgagcccggcacccagctgacgatgcgcacc
ttccacaccggtggcgtggccgccggcggcggaggagacatcacgcagggtctgccgcgt
gtgaccgagctgttcgaggcgcgcacgcccaagggattcgcgccgatcgccgaggccacc
ggccgggtcaagatcgatgactcgcgcaagacgcgctacgtcatcatcgtgcccgacgac
ggggccgaggagatcgagcacgccgtgggccgccgctcgcagctgctcgtcgaggacggc
cagcacatcaccgccggtgagaagctcgtccagggcgctgtcgaccccaagcaggtgctc
cgcatccgcggtcgccgggaggccgagcgcttcctcgtcgacgaggtgcagaaggtgtac
cgctcgcagggcgtgggcatccacgacaagcacatcgaggtcatcgtgcgccagatgctc
cggcgcgtcaccgtcatcgagtccggcgacacgacgctgctgcccggcgagctcgtggac
cgcgggcggtaccaggcggagaaccggcggatcgtcgccgagggcggcacccccgcctcg
gcccgcgacgagctcatgggcatcaccaaggcctcgctcgcgaccgagtcgtggctgtcg
gcggcctccttccaggagaccacccgtgtgctcaccgaggcggccctcgagggcaagtcg
gatccgctgctcggcctcaaggagaacgtcatcctcggtaagctcatcccggccggaacc
ggaatgcacaagttccgcgacatggtcgtcgagcccaccgaggaggccaagcaggagatg
ttcagcaactcctacggcgacttctacccgagcctgaccggggagggtgcggccatcccg
ctcgaggactacgacttcggagcgttcagctga |