Brevibacterium sp. CS2: FDF13_01190
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Entry
FDF13_01190 CDS
T05958
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bri
Brevibacterium sp. CS2
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bri03032
]
FDF13_01190 (topA)
03400 DNA repair and recombination proteins [BR:
bri03400
]
FDF13_01190 (topA)
Enzymes [BR:
bri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FDF13_01190 (topA)
DNA replication proteins [BR:
bri03032
]
Prokaryotic type
DNA Topoisomerases
FDF13_01190 (topA)
DNA repair and recombination proteins [BR:
bri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FDF13_01190 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
MacB_PCD
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
QCP04094
UniProt:
A0A4P8H7K2
LinkDB
All DBs
Position
complement(261721..264567)
Genome browser
AA seq
948 aa
AA seq
DB search
MASSTSQPRRLVIVESPTKARTIVGYLGDGYDVEASVGHIRDLPQPSELPADMKKGPYGK
FAVDVDNGFAPYYRVDPGKKKKVSELKALLKDADELFLATDEDREGEAIAWHLLEVLKPK
IPVKRMVFHEITPEAIARALENTRELDTSLVDAQETRRILDRLYGYEVSPVLWRKVNRGL
SAGRVQSVATRLVVERERERMAFVSADYWDLDIDLAVPGKGNAFSARLATYHGTKVASGR
DFDDAGKLKGKSDVVVLDEEMATALANTLNTTAKDRLTVSALETKPYSRRPAAPFTTSTL
QQEAGRKLRLSSRQAMRVAQSLYENGYITYMRTDSSALSGQAVSAARRQVSELYGPEYVP
DTPRMYSGKQKSAQEAHEAIRPAGDSFRTPAQVSGKLSGDEFRLYDLIWKRTVASQMADA
KGKTATMRITADLGEDKTAGFTASGTVITFRGFLAAYEEGKDVDRYDTGAGESRLPEVSE
GQQLTVDRAEAAGHTTAPPPRYTEASLVKTMEELGIGRPSTYAAIISTIQDRGYVRTRGN
ALVPTWVAFSVVRLLELHFRGLIDYQFTAGMESDLDRIASGEEDRNDWLTAFYFGDRTED
HPGLKPTVDDLGDIDAREINTIEIAEGIDLRVGRYGPYLEVAQDGEDPKRVSVPEDLAPD
ELTAEKARELIASHGDGDRELGTDPETGHTIVAKSGRFGPYVTEVLPEAEETKGRKKVKP
RTGSLFKSMDLSTVDLEQALKLLSLPREVGTDAEGTVITAQNGRYGPYLKKGTDSRSLTE
EEQIFSITLDEALEIYSQPKQRGRRAAAPPLKELGEDPESKKPVVVKDGRFGPYVTDGDT
NATLRKDDSVEGITPARAFELLAEKRAKGPAKKKTTAKKAPAKKTAAKKPAAKKSTTAKS
TVSKTAGSKTTAAKKPAAKSTTARTTAAKKTTAKKATATKSTGKPTTA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcctccacctcgcagccgcgccgactcgtcatcgtcgagtcgccgaccaaggcc
cgcacgatcgtggggtacctgggtgacggctacgacgtcgaagcctccgtgggccacatc
cgcgacctcccgcagccctccgagctgcccgccgacatgaagaaggggccctacggcaag
ttcgccgtcgacgtcgacaacggcttcgccccctactaccgcgtggacccgggcaagaag
aagaaggtctccgagctcaaggcgctcctcaaggacgccgacgaactcttcctcgccacc
gatgaggaccgggagggcgaggcgatcgcctggcacctcctcgaggtcctcaagcccaag
atcccggtcaagcgcatggtgttccacgagatcacccccgaggcgatcgcccgggcgctc
gagaacacccgcgagctcgacacctcgctcgtcgacgcccaggagacccgccgcatcctc
gaccgcctctacggctacgaggtctccccggtgctgtggcgcaaggtcaaccgcggcctg
tccgccggccgcgtgcagtccgtggcgacccgcctcgtcgtcgagcgcgagcgcgagcgc
atggcgttcgtgtccgccgactactgggacctcgacatcgacctcgcggtgccgggcaag
ggcaatgccttctccgcccgtctcgccacctaccacggcaccaaggtcgccagcggccgc
gacttcgacgacgccggcaaactcaagggcaagagcgacgtcgtcgtgctcgacgaggag
atggcgaccgcgctcgcgaacaccctcaacaccacggccaaggatcggctcaccgtctcc
gcgctggagaccaagccctactcccgccgacccgccgcccccttcaccacctcgaccctg
cagcaggaggccggccgcaagctgcgcctgtcctcccgccaggcgatgcgcgtggcccag
tcgctctacgagaacggctacatcacctacatgcgcaccgactcctcggcgctgtcgggc
caggcggtctccgccgcccgccgtcaggtctcggagctgtacggtcccgaatacgtgccg
gacacgccgcgcatgtactccggcaagcagaagtcagcgcaggaggcgcacgaggcgatc
cgacccgccggcgactccttccgcacgcccgcccaggtgtccgggaagctctccggcgac
gagttccgcctctacgacctcatctggaagcgcaccgtcgcctcccagatggccgatgcc
aagggcaagacggccacgatgcggatcaccgccgacctcggtgaggacaagacggcgggc
ttcaccgcctcgggcacggtcatcaccttccgcgggttcctcgccgcctacgaggagggc
aaggacgtcgaccgctacgacaccggggccggcgaatcgcgcctgcccgaggtgtccgag
ggtcagcagctcaccgtcgatcgcgccgaggccgccggccataccaccgctccgccgccg
cgctacaccgaggcgagcctggtcaagaccatggaggagctcgggatcgggcgcccctcg
acctatgccgcgatcatctccacgatccaggaccgcggctacgtccgcacccgcggcaat
gcgctcgtccccacctgggtcgcgttctccgtggtgcggctcctcgagctccacttccgc
gggctcatcgactaccagttcaccgccggcatggagtccgacctcgaccggatcgcctcc
ggcgaggaggaccgcaacgactggctgaccgcgttctacttcggcgaccggaccgaggat
catcccggtctcaagccgaccgtcgacgacctcggcgacatcgacgcccgcgagatcaac
acgatcgagatcgccgagggcatcgacctgcgggtgggccgctacggcccctacctcgag
gtggcgcaggacggcgaggatcccaagcgcgtgtccgtgccggaggacctcgcccccgac
gagctcaccgcggagaaggcccgcgaactcatcgccagccacggcgacggggaccgcgag
ctcggcaccgatccggagaccgggcacacgatcgtcgcgaagtccggtcggttcggcccc
tacgtcaccgaggtgctgcccgaggccgaggagacgaagggccgcaagaaggtcaagccg
cgcaccggctccctgttcaagtccatggacctctcgaccgtcgacctcgagcaggcgctc
aagctgctgagcctgccgcgcgaggtcgggaccgacgccgaggggacggtcatcaccgcg
cagaacggccgctacgggccctacctcaagaagggcaccgattcgcgctcgctcaccgag
gaggagcagatcttctcgatcaccctcgacgaggcgctcgagatctactcccagcccaag
cagcgcggccgccgtgccgccgcacccccgctcaaggagctcggcgaggacccggagtcg
aagaagccggtcgtcgtcaaggacgggcggttcgggccctacgtcaccgacggggacacg
aacgcaaccctgcgcaaggacgactccgtcgagggcatcaccccggcgcgcgccttcgaa
ctcctcgcggagaagcgggccaaggggcctgcgaagaagaagacgaccgcgaagaaggcc
ccggccaagaagaccgcagccaagaagcctgccgcgaagaagtcgacgacggccaagagc
acggtgtcgaagacggcaggctcgaagaccacggctgcgaagaagccggcggccaagtcg
acgacggcgcggaccaccgcggcgaagaagacgactgcgaagaaggccacggcgacgaag
tcgaccggcaagccgaccaccgcctga
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