Brevibacterium sp. CS2: FDF13_05025
Help
Entry
FDF13_05025 CDS
T05958
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bri
Brevibacterium sp. CS2
Pathway
bri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDF13_05025 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bri03019
]
FDF13_05025 (recQ)
03400 DNA repair and recombination proteins [BR:
bri03400
]
FDF13_05025 (recQ)
Enzymes [BR:
bri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDF13_05025 (recQ)
Messenger RNA biogenesis [BR:
bri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FDF13_05025 (recQ)
DNA repair and recombination proteins [BR:
bri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FDF13_05025 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QCP06452
LinkDB
All DBs
Position
1148099..1150069
Genome browser
AA seq
656 aa
AA seq
DB search
MSTDDPAPGDPGAGAGESAGAWVTVDDPPGGGPGESDSAPAGSPEALRILSEVFGYDSFR
GDQGAIIDHVAGGGDAVVLMPTGGGKSLCYQIPSLLRPGTGIVVSPLIALMADQVAALES
LGIRAAFLNSSLDVDEARAVEAAFEAGELDLLYMAPERLVLERTRALLRRGHVSLFAIDE
AHCVSQWGHDFRRDYLGLSLLAEEFPQIPRIALTATATRATHEELTERLRMGRARHFVSS
FDRPNIQYRIVPKDQARKQLMDFIAGEHSGEAGIVYCLSRKSVDAVAQALDARGIPALPY
HAGMDAADRAANQARFLHEDGIVMVATIAFGMGIDKPDVRFVAHLDLPKSIEGYYQETGR
AGRDGLAATAWMAYGLGDVVNQRRLIDSGEGSAEFQRSQRAHLDAMLALCETVDCRRVQL
LRYFGQESEPCGNCDTCLNPPRTWEATIAAQKLLSALIRLDRERGQQFGSGQVIDVLLGR
DNPRSAQSRHEELSVWGVGAELSEKQWRTVIRQLMAADIVAAAGEYNVLVPGPRATGVLR
GEEIVHLRDDPEPARASRRSRSASGAGGARASAADGLEGADRELFEALRDWRTETAREKK
IPPYMVFSDATLVGIVEARPTSIGALGTVSGVGLKKRAEYGEAILAVIAGAASPSG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgatgaccccgcgcctggtgacccgggagcgggtgcgggggagtcggcgggc
gcctgggtgacggtggacgacccgcccgggggagggcccggcgagtcggactcggctccc
gccggctccccggaggcgctgcggatcctctccgaggtcttcggctacgactccttccgc
ggcgaccagggtgcgatcatcgaccacgtcgccggcggtggggacgcggtcgtcctcatg
cccaccggcggcggcaagtcgctgtgctaccagatcccctcgctgctgcgcccgggcacc
gggatcgtcgtctccccgctcatcgccctcatggccgaccaggtcgcggcgctcgaatcg
ctcggcatccgggcggcgttcctcaactcctcgctcgacgtcgacgaggcgcgcgccgtc
gaggcggcgttcgaggccggcgagctcgacctcctctacatggccccggagcggctcgtc
ctcgaacgcacccgcgccctgctccggcgcgggcacgtgtcgctgttcgccatcgacgag
gcccactgcgtctcccaatgggggcacgacttccggcgcgactacctggggctgtccctc
ctcgccgaggagttcccgcagatcccgaggatcgcgctcaccgcgaccgccacccgcgcc
acccacgaggagctcaccgagcgcctccggatgggccgggcccggcacttcgtgtcgagc
ttcgaccggccgaacatccagtaccggatcgtgcccaaggaccaggcgcgcaagcagctc
atggacttcatcgccggtgagcactccggcgaggccgggatcgtctactgcctgtcgcgc
aagagcgtcgacgccgtcgcgcaggcgctcgacgcccgcgggatcccggccctgccctac
cacgcgggcatggacgccgccgaccgcgcggcgaaccaggcgcggttcctccacgaggac
ggcatcgtcatggtcgcgacgatcgcgttcgggatgggcatcgacaaacccgacgtccgg
ttcgtcgcccacctcgacctgccgaaatcgatcgagggctactaccaggagaccgggcga
gccgggcgtgacggcctcgccgcgaccgcctggatggcctacgggctcggcgacgtcgtc
aaccagcggcggctcatcgactccggggagggctcggcagagttccagcgcagccagcgc
gcccacctcgacgcgatgctcgccctgtgcgagaccgtcgactgccgccgcgtccagctg
ctgcgctacttcggacaggagtccgagccgtgcggcaactgcgacacctgcctgaacccg
ccgcgcacctgggaggcgacgatcgccgcgcagaagctcctgtccgcgctcatccggctc
gaccgcgaacgcggccagcagttcggctccggccaggtcatcgacgtgctgctcggccgc
gacaacccgcgctccgcgcagtcccggcacgaggagctcagcgtctggggcgtgggcgcg
gagctgtccgagaagcagtggcggaccgtcatccggcagctcatggccgccgacatcgtc
gccgcggccggtgagtacaacgtgctggtgcccggaccccgcgccaccggggtgctgcgc
ggggaggagatcgtgcatctgcgcgacgacccggagccggcccgggcgtcccgccgctcc
cgcagtgcgagcggtgcgggaggggcccgcgcctcggcggcggacgggctggagggtgcg
gatagggagctgttcgaggcgctgcgcgactggcgcacggagaccgcgcgggagaagaag
atcccgccctacatggtgttctccgacgccacgctcgtcggcatcgtcgaagcccggccg
acctcgatcggtgcgctcggcaccgtgagcggggtgggcctgaagaagcgtgccgagtac
ggcgaggcgatcctcgcggtcatcgcaggcgctgcgagcccgtcagggtaa
DBGET
integrated database retrieval system
