Brevibacterium sp. CS2: FDF13_09370
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Entry
FDF13_09370 CDS
T05958
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bri
Brevibacterium sp. CS2
Pathway
bri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDF13_09370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bri03021
]
FDF13_09370
03019 Messenger RNA biogenesis [BR:
bri03019
]
FDF13_09370
Transcription machinery [BR:
bri03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FDF13_09370
Messenger RNA biogenesis [BR:
bri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FDF13_09370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
AAA_22
Spore_III_AA
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCP05467
UniProt:
A0A4P8H8X5
LinkDB
All DBs
Position
2101654..2103759
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AA seq
701 aa
AA seq
DB search
MTETTNNDSAARTGSLTALRLPQLQEMAAGLGIKGYRRLRKSDLIDAINSAGGRQSAAPA
RRSQAAEAPAAPAAEAPAAPTTPASAPEAPTGNMQGAEQTEGEQRSRRSPRRRGGDAAQA
GETRGQGAESGTPAEERGEQPGRGRRRGGDRDENRDQGDSRAERGGDQGGDKRDHGSDRS
DDRNRDRGNDRNNDHGGERNSDRNERGGDRNGNRDRNDRNNDRNNERGNDRNDRGNDRNN
DRNERGDNRDRNDRNNDRNDRNNDRNDRNDRGGQNRDRGNDRHDRDSDRRGRNRGRDRKR
RGGRNDFDEPELRPDDVLIPVGGILDVHDNYAFLRTTNYLPGPNDVYVSANMVKRNGLRK
GDVVVGAIRQSREGEQRSGKREKFDALVRLDSVNGLSVEDAKRRVEFSKLTPLYPQERLR
METTSKQISGRIIDLVAPIGKGQRGLIVAPPKAGKTMIMQQIANAIAANNPAVHLMVVLV
DERPEEVTDMERAVKGEVIASTFDRPADDHTTIAELAIERAKRLVEMGQDVVVLLDNITR
LGRAYNLAQPASGRILSGGVDANALYPPKKFFGAARNIEGGGSLTILATALVETGSKMDE
VIFEEFKGTGNMELRLSRHLADKRIYPAVDVNSSGTRREENLMSPEERKIMWKLRRVLSG
LEQQQSLELLLSKLKETGSNAEFLMQVQKTTPLPKSAADEH
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagaccacgaacaatgactctgccgcccgcacgggaagcctgaccgcactgcgg
ctcccgcagctccaggagatggcagcaggtctgggtatcaagggataccggcgtctgcgc
aagagcgacctcatcgacgccatcaactccgccggcggacggcagagcgccgccccggcc
cgccgttcgcaggccgccgaggcgcccgccgctcccgctgccgaggcgcccgccgccccg
acgacccccgcctccgcgcccgaggcccccaccgggaacatgcagggtgccgagcagacc
gagggcgagcagcgctcgcgccgctcgccgcgccgtcgcggcggcgatgccgcgcaggcc
ggtgagacccgtgggcagggtgccgagtccggcacccccgccgaggagcgcggcgagcag
cccggccgcggccgacgccgcggcggcgaccgcgacgagaaccgcgaccagggcgactcc
cgcgccgagcgcgggggagaccagggcggcgacaagcgcgaccacggcagcgaccgcagc
gatgaccggaaccgtgatcgtgggaacgaccggaacaacgaccacggcggcgagcggaac
agcgatcgcaacgagcggggcggcgaccggaacggcaaccgcgaccgcaatgaccgcaac
aacgatcgcaacaacgagcgcggcaacgatcgcaacgatcgcggcaatgaccggaacaac
gaccggaacgagcgcggcgacaaccgtgatcgtaatgaccggaacaacgaccgcaatgac
cggaacaatgaccggaacgaccgcaacgaccgcggcggccagaaccgggaccgcgggaac
gaccgccacgaccgcgactccgaccggcgcggccggaaccgggggcgcgaccgcaagcgg
cgcggtgggcgcaacgacttcgacgagccggagctccggcccgacgacgtgctcatcccc
gtcggcggcatcctcgatgtccacgacaactacgccttcctgcgcacgacgaactacctc
ccggggccgaacgacgtctacgtctcggcgaacatggtcaagcgcaacggcctgcgcaag
ggcgacgtcgtcgtcggcgcgatccgccagtcccgcgagggcgagcagcgctccggcaag
cgcgagaagttcgatgcgctcgtgcgcctcgactccgtcaacggcctgagcgtcgaggac
gccaagcggcgcgtcgagttctccaagctcaccccgctctacccgcaggagcgcctgcgg
atggagaccacctcgaagcagatctccggacgcatcatcgacctcgtcgccccgatcggc
aagggtcagcgcggcctcatcgtcgcgccgcccaaggccggcaagacgatgatcatgcag
cagatcgcgaacgcgatcgccgcgaacaaccccgcggtgcacctcatggtcgtgctcgtc
gacgagcgccccgaagaggtcaccgacatggagcgcgcggtcaagggcgaggtcatcgcc
tcgaccttcgaccgcccggcggacgaccacacgacgatcgccgagctcgccatcgagcgc
gccaagcgcctcgtcgagatgggccaggacgtcgtcgtgctcctcgacaacatcacccgc
ctggggcgcgcctacaacctcgcccagccggcgtccggacgcatcctgtccggcggtgtg
gacgccaatgcgctctacccgccgaagaagttcttcggtgccgcgcgcaacatcgagggc
ggcggctcgctcaccatcctcgccaccgcgctcgtcgagaccgggtcgaagatggacgag
gtgatcttcgaggagttcaagggcaccggcaacatggagctgcgcctcagccgccacctc
gcggacaagcgcatctacccggccgtggacgtcaactcctcgggcacccgtcgtgaggag
aacctcatgagcccagaggagcggaagattatgtggaagctgcgtcgcgtgctgtccggt
ctcgagcagcagcagtcgctcgagctgctcctgtcgaagctcaaggagaccggctcgaac
gcggagttcctcatgcaggtgcagaagacgactccgctgccgaagtccgccgccgacgag
cactga
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