Brevibacterium sp. CS2: FDF13_10890
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Entry
FDF13_10890 CDS
T05958
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bri
Brevibacterium sp. CS2
Pathway
bri03030
DNA replication
bri03430
Mismatch repair
bri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDF13_10890
03430 Mismatch repair
FDF13_10890
03440 Homologous recombination
FDF13_10890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bri03032
]
FDF13_10890
03400 DNA repair and recombination proteins [BR:
bri03400
]
FDF13_10890
Enzymes [BR:
bri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDF13_10890
DNA replication proteins [BR:
bri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDF13_10890
DNA repair and recombination proteins [BR:
bri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDF13_10890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
QCP05720
LinkDB
All DBs
Position
complement(2416853..2418589)
Genome browser
AA seq
578 aa
AA seq
DB search
MSIHRAPRAFDRDERPRSGQLDLSDLGTPLEEVTFVVVDLETTGSTDITEIGAVKLRSGE
VLGEFSTLVRPRTSTISPFVERLTGITNGMVAGAPELDSVLPAFLEFARGSVLVAHNAGF
DIGYLKAACSSLDYAWPDPPVLDTVKLARQVVPRGEVVNHKLGTLAAHFGTAVAPDHRAL
ADARATGEILHRLFDRFGTFGITTLEDLQRLKPAGWQKRRTKAHLATGVPEGPGVYMFLD
GSRRVLYIGVSRNMRARVRNYFTAGETRGRMAEMITAAQEVSTVPCDTHLEAEVREVRLI
GELAPPYNRRSKHPERRTWLRLTDEEFPRLSVVRTAPASADDAARRLGPFRTHRRAQEAK
RALDRLFPLKQCTQKPHHAAFAPCASGELGRCGGPCAGNWDAEAYRAGITGVHDLLVGDP
AEFVRRCRERMAALTAGERFETAAEVRDAMTGLLSSLAAQERQAGLAAIEECVAAVPTPG
GGWDLALVRWGRLAGSARVPGGVNPYPAIESLRLTAEHVEQPSVDAPAALAQETALIHRR
LADGSTRLVRTTGGWSEPLTGFGRVLGSFGPLGGTPAV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccaccgcgccccgagggctttcgaccgggacgagcggccgcgctccgggcag
ctcgacctcagcgatctcggcaccccgctggaagaggtgaccttcgtcgtcgtcgacctc
gagacgaccggctcgaccgacatcaccgagatcggcgcggtcaagctccgcagcggcgag
gtgctcggcgagttctccaccctggtccggccgcgcacgagcacgatctccccgttcgtc
gaacgactgaccgggatcaccaacggcatggtcgccggcgccccggaactcgattcggtg
ctccccgcgttcctcgagttcgcgcggggatccgtcctcgtcgcccacaacgcaggcttc
gacatcggctacctcaaggccgcctgcagctcgctcgactacgcctggccggacccgccc
gtgctcgacaccgtcaagctcgcccgccaggtcgtgccccgcggagaggtcgtcaaccac
aagctcggcacactcgccgcgcatttcggcaccgcggtggccccggaccaccgggcactg
gcggatgcgcgggcgaccggggagatcctccaccggctgttcgaccgcttcggcaccttc
ggcatcaccaccctcgaagacctccagcgcctcaagccggccggatggcagaagcgccgc
accaaggcccacctcgccacgggggtcccggaaggacccggtgtgtacatgttcctcgac
ggctcccggcgggtgctctacatcggggtgagccggaacatgcgggcccgcgtgcgcaac
tacttcacggccggggagacccgcggtcgcatggcggagatgatcaccgccgcccaggag
gtcagcacggtcccctgcgacacgcacctcgaggcggaggtcagggaggtcaggctcatc
ggcgagctcgccccgccctacaaccgacggtccaagcatccggaacgccgcacctggctc
cggctcaccgacgaggagttcccgcgcctctcggtcgtgcggacagcaccggcctcggcg
gacgacgccgcgcgccggctcgggccgttccggacccaccgccgcgcccaggaggccaag
cgcgccctggaccgcctcttcccgctcaagcagtgcacgcagaagccgcaccacgccgcc
ttcgccccgtgcgcctccggggagctcggtcgctgcggcggaccgtgcgccgggaactgg
gacgccgaggcctaccgggccggcatcaccggcgtccacgatctcctcgtcggcgacccg
gcggagttcgtccggcgctgccgggagcgcatggccgccctcaccgcgggcgagcgcttc
gagaccgccgccgaggtgcgcgacgcgatgaccgggctgctctcctcgctcgccgcccag
gagcggcaggccgggctcgctgcgatcgaggagtgcgtcgccgccgtgccgacgccgggg
ggcggctgggacctcgccctcgtccgctggggccggctcgccgggagcgcccgcgtgccg
gggggcgtcaatccctatccggcgatcgagtcgctgcggctcaccgccgagcacgtcgag
cagccgtccgtggatgcgccggcggcgctcgcccaggagaccgcgctgatccatcggcgg
ctggccgacgggagcacgcggctggtgcgcaccaccggcggctggagcgagccgctcacc
ggcttcgggcgcgtcctcgggtcattcggtccgctcggcggcaccccagcggtgtga
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