Brevibacterium sp. CS2: FDF13_12135
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Entry
FDF13_12135 CDS
T05958
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bri
Brevibacterium sp. CS2
Pathway
bri03030
DNA replication
bri03430
Mismatch repair
bri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FDF13_12135 (holA)
03430 Mismatch repair
FDF13_12135 (holA)
03440 Homologous recombination
FDF13_12135 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bri03032
]
FDF13_12135 (holA)
03400 DNA repair and recombination proteins [BR:
bri03400
]
FDF13_12135 (holA)
Enzymes [BR:
bri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FDF13_12135 (holA)
DNA replication proteins [BR:
bri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FDF13_12135 (holA)
DNA repair and recombination proteins [BR:
bri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FDF13_12135 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QCP05937
UniProt:
A0A4P8HA62
LinkDB
All DBs
Position
complement(2687534..2688520)
Genome browser
AA seq
328 aa
AA seq
DB search
MAAKKTLVPWTRAKPAPVVVISGGESVLVRKAQDRIVAACRKHKDLETTHLDAVRYEAGD
LAMAAAPSLFATRKLVIVDSVAQCGDDFLQDALAYVGEVNEDAVVLLKHSGGNRGSKLLT
AIDKAGYPRIDAQVMKSESDRQDFALAEFKRAERTIEPPALAALMSALGADLSELNAGIE
QLLQDTTGPITEAMVDRYYGGRVEATGFKVADAAVAGRSAEALTLLRHALATGTDPVPLV
AALALKLRTMARVQGVSGSPGQLASELKMAPWQVDRARRDLRSWNDLALGQALLAVARAD
EEVKGAGRDPVYAVERLVTRVSAQARRH
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaagaagaccctcgtgccgtggacccgcgccaagccggcgcccgtcgtcgtg
atctccgggggtgaatccgtgctcgtgcgcaaggcgcaggaccgcatcgtcgcggcctgc
cgcaagcacaaggacctcgagaccacgcacctcgacgccgtgcgctacgaggccggtgac
ctcgcgatggccgccgccccgtcgctgttcgccacccgcaagctcgtcatcgtcgactcc
gtcgcccagtgcggcgacgacttcctccaggacgcgctggcctacgtcggcgaggtcaac
gaggacgccgtcgtcctcctcaagcactccggcggcaaccgcggctccaagctcctcacc
gcgatcgacaaggccggctacccgcgcatcgacgcacaggtgatgaagagcgaatccgac
cgccaggacttcgcactcgcggagttcaagcgcgccgagcggaccatcgagcccccggcc
ctcgccgcgctcatgagcgcgctcggcgcggacctgtccgagctcaacgccgggatcgag
cagctcctccaggacactacggggccgatcaccgaggcgatggtcgatcgctactacggc
gggcgggtcgaggcgaccggcttcaaggtcgccgacgccgcggtcgccggccgctccgcg
gaggccctcacgctgctgcgtcacgcgctcgccaccggcaccgacccggtgccgctcgtc
gccgcgctcgcgctcaagctgcgcaccatggcccgcgtccagggggtctccggcagtccc
ggccaactcgcctcggagctcaagatggccccctggcaggtcgaccgcgcccgccgcgac
ctccgctcctggaacgacctcgcactcggccaggcgctcctcgcggtcgcccgcgcggac
gaggaggtcaagggcgccggccgggacccggtctatgccgtcgaacggctcgtcacccgg
gtgagcgcgcaggcccgccggcactga
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