Entry |
|
Name |
|
KO |
|
Organism |
bri Brevibacterium sp. CS2
|
Brite |
KEGG Orthology (KO) [BR:bri00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:bri03016]
FDF13_12395
Enzymes [BR:bri01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FDF13_12395
Transfer RNA biogenesis [BR:bri03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FDF13_12395
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2748073..2749245
|
AA seq |
390 aa
MLSAPADGVPDIVDTPDALAAAVRDLAAGTGAVAVDAERASGIRYGGRAFLIQLRRAGAG
TILIDPEALPDLSTVDDALRGAEWVLHASTQDLPCLAERGMRPDALFDTELAARMLDFER
FGLAAVVGETLGVRLAKEHSNVDWSGRPLPRDWLTYAALDVELLIEVSDILQAQLQETGK
AEFAQQEFDHLLDFTPNVYAEPWRRVQGLGSVKSRRGLARVRSLWTARDRVAAAQDLAPS
QILRDRHLIALVGIDARTPDDLRRVPGVPGMDRSARLRWHKALSDADALPEAELPDHRSA
DAEAPAEVDRNRVKARLDLMKPAVQEVARDLQMPHEVVLTPRHVKTLAGRRTIGDEQAVA
AFLAERGARPWQIEATAGVLARAAAEADRD |
NT seq |
1173 nt +upstreamnt +downstreamnt
ctgctgtccgcccccgcggacggggtgcccgacatcgtcgacaccccggacgccctcgcc
gcggcggtccgcgacctggccgccggcaccggtgcggtggccgtcgacgccgagcgcgcc
tcgggcatccgctacggcgggcgcgccttcctcatccagctgcgccgcgcgggcgccggg
acgatcctcatcgaccccgaggcgctgccggacctgtccacggtcgacgacgccctgcgc
ggcgccgaatgggtgctccacgcctcgacccaggacctcccctgcctcgccgagcgcggg
atgcgccccgacgccctgttcgacaccgagctcgccgcgcgcatgctcgacttcgaacgc
ttcggactcgccgcggtcgtcggcgagacgctcggcgtccgcctggcgaaggagcactcg
aacgtcgactggtcgggccgtccgctgccgcgcgactggctgacctacgccgcgctcgac
gtcgagctcctcatcgaggtcagcgacatcctccaggcgcagctccaagagaccggcaag
gccgagttcgcacagcaggagttcgaccacctcctcgacttcacccccaacgtctacgcg
gagccgtggcgccgcgtgcagggcctgggctcggtgaaatcccgccgcggcctggcgcgc
gtccggtccctgtggacagcccgggaccgggtcgccgccgcgcaggacctcgcaccgagc
cagatcctgcgcgaccgccacctcatcgcactcgtcggcatcgatgcccgcactcccgac
gacctgcggcgcgtcccgggcgtacccgggatggaccgctcggcgcgcctgcgctggcac
aaggccctgagcgatgccgacgccctgcccgaggccgagctccccgatcaccgctccgcg
gacgccgaggcacccgccgaggtcgaccggaaccgcgtcaaggcgcgcctcgatctcatg
aagcccgccgtccaggaggtcgcgcgggacctgcagatgccgcacgaggtcgtcctcacc
ccgcgccacgtcaagactctcgccggccggcgcaccatcggggacgaacaggccgtcgca
gcgttcctcgccgagcgcggcgcccggccctggcagatcgaggcgacggccggagtgctc
gcccgggccgccgccgaggccgaccgggactga |