Brevibacterium sp. CS2: FDF13_13495
Help
Entry
FDF13_13495 CDS
T05958
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bri
Brevibacterium sp. CS2
Pathway
bri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FDF13_13495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bri03019
]
FDF13_13495
03016 Transfer RNA biogenesis [BR:
bri03016
]
FDF13_13495
Enzymes [BR:
bri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FDF13_13495
Messenger RNA biogenesis [BR:
bri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FDF13_13495
Transfer RNA biogenesis [BR:
bri03016
]
Prokaryotic type
tRNA degradation factors
FDF13_13495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
PCB_OB
KH_2
PKD_3
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QCP06171
UniProt:
A0A4V1EC32
LinkDB
All DBs
Position
complement(3005450..3007681)
Genome browser
AA seq
743 aa
AA seq
DB search
MGLNPESAVAHIDNGRFGSHTVRFETGRLAQQAAGTAVAYLDDETMLMSATTAGKSPKEH
FDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVKGLRNEVQV
VVTVMSIHPDHIYDTLAINAASLSTQLSGLPFSGPIGGVRVALIEDQWVAFPNYSQLQDA
TFDMAIAGRVVGDDVAIMMVEAEATEQSWDLVQGGATAPTEEIVADGIEAAKPFIRELVR
AQQELADKAAKPTVEFPVFREYQDDVYADVEKLAFEQQTKNFQIADKQEREAAGDALLDT
LFSELGEKYAGREKEIAGALNALTKKVVRQRILTEQVRIDGRGLKDIRPLTAEVGVLPRV
HGSALFERGETQILGVTTLNMLKLEQQIDSLSPVTRKRYLHHYNFPPYSTGETGRVGSPK
RREIGHGALAERALVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTLSMFNAGVPL
RAPVAGIAMGLVSDVVQTDSGPQTAYAALTDILGAEDAFGDMDFKVAGTSEYITAIQLDT
KLDGLPAAVLTAALKQAKEARDVILEVIAAAIDGPAEMAPTAPRIISVRIPVDKIGEVIG
PKGKMINQIQEDTGAEISIEDDGTVLIGATDGPAADAARSAINAIANPQVPEVGERYLGT
VVKCMSFGAFVSLSPGKDGLLHISELRKLNDGKRVEDVEDVVSVGQKIQVEITKVDDRGK
LSLVPVTDEDDAESGQDAAGAEE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
ttgggcctcaatcccgaatcagcagtcgcacacatcgacaacgggcgcttcggctcccac
accgtccggttcgagaccggacgcctcgcgcagcaggccgccggcaccgccgtcgcctac
ctcgacgacgagaccatgctcatgtcggccaccaccgccggcaagtccccgaaggagcac
ttcgacttcttccccctcaccgtggacgtcgaggagcggatgtacgccgccggccgcatc
cccggctccttcttccgccgcgagggccgtccctcgacggacgcgatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcgtcaagggcctgcgcaacgaggtgcaggtc
gtcgtcacggtgatgtcgatccaccccgaccacatctacgacaccctggcgatcaacgcc
gcctcgctgtcgacgcagctctccggcctgcccttctccggcccgatcggcggtgtgcgc
gtcgcgctcatcgaggaccagtgggtcgcgttccccaactactcgcagctgcaggacgcc
accttcgacatggcgatcgccggccgcgtcgtcggtgacgacgtcgcgatcatgatggtc
gaggccgaggccacggagcagtcctgggatctcgtccagggcggcgccaccgcgccgacc
gaggagatcgtcgccgacggcatcgaggccgccaagcccttcatccgcgaactcgtccgc
gcccagcaggagctcgccgacaaggccgcgaagccgaccgtcgagttcccggtcttccgt
gagtaccaggacgacgtctacgccgacgtcgagaagctcgccttcgagcagcagacgaag
aacttccagatcgcggacaagcaggagcgcgaagccgccggcgacgccctcctcgacacc
ctcttcagcgagctcggcgagaagtacgccggccgcgagaaggagatcgcgggcgccctc
aacgcgctgaccaagaaggtcgtgcggcagcggatcctcaccgagcaggtgcgcatcgac
ggccgcggcctcaaggacatccggccgctcaccgccgaggtcggcgtgctcccgcgcgtc
cacggctcggccctgttcgagcgcggcgagacccagatcctcggcgtcaccacgctcaac
atgctcaagctcgagcagcagatcgactcgctgtcgccggtgacgcgcaagcgctacctc
caccactacaacttcccgccgtactccaccggcgagaccggtcgcgtcggcagccccaag
cgccgcgagatcggccacggcgcgctcgccgagcgcgccctcgtcccggtgctgcccacg
cgtgaggagttcccctacgcgatccgccaggtgtccgaggcgctcggctccaacggctcg
acctcaatgggctccgtctgcgcctcgaccctgtcgatgttcaacgccggtgtgccgctg
cgggcccccgtggccggcatcgcgatgggcctcgtgtccgacgtcgtccagaccgacagc
ggcccgcagacggcctacgccgcgctcaccgacatcctcggcgccgaggacgccttcggc
gacatggacttcaaggtcgccggcacctcggagtacatcaccgcgatccagctcgacacc
aagctcgacggactcccggcggccgtgctcaccgctgcgctcaagcaggcgaaggaggcc
cgcgacgtcatcctcgaggtcatcgccgcggcgatcgacgggccggcggagatggcgccg
accgcgccgcgcatcatctcggtgcgcatcccggtcgacaagatcggcgaggtcatcggc
cccaagggcaagatgatcaaccagatccaggaggacaccggagcggagatcagcatcgag
gacgacggcaccgtgctcatcggggcgaccgacggtccggccgccgacgccgcgcgctcg
gcgatcaacgcgatcgccaacccgcaggtccccgaggtcggcgagcgctacctcggcacc
gtggtcaagtgcatgtccttcggcgccttcgtgtcgctgagccccggcaaggacggcctg
ctccacatctccgagctgcgcaagctcaacgacggcaagcgcgtcgaggatgtcgaggac
gtcgtgtccgtgggtcagaagatccaggtcgagatcaccaaggtcgacgaccgcggcaag
ctctcgctcgtccccgtcaccgatgaggacgacgccgagagcggccaggacgccgccggg
gccgaggagtaa
DBGET
integrated database retrieval system
