Brucella sp. 09RB8471: BKD03_10225
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Entry
BKD03_10225 CDS
T06323
Name
(GenBank) helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
brj
Brucella sp. 09RB8471
Pathway
brj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKD03_10225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brj03019
]
BKD03_10225
03009 Ribosome biogenesis [BR:
brj03009
]
BKD03_10225
Enzymes [BR:
brj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BKD03_10225
Messenger RNA biogenesis [BR:
brj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BKD03_10225
Ribosome biogenesis [BR:
brj03009
]
Prokaryotic type
rRNA helicases
BKD03_10225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
APX69711
LinkDB
All DBs
Position
2:complement(826278..828158)
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AA seq
626 aa
AA seq
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MSLPDTIAPALSGALTARGYNTLTAVQNAVLAPETLASDLLVSAQTGSGKTVAFGLAMAN
TILEDELCFGDAGAPLAMIIAPTRELALQVRRELEWLYADTGARIASCVGGMDIRTERRA
LERGSHIVVGTPGRLRDHITRNALDMSQLRAIVLDEADEMLDMGFREDLEFILGEAPEDR
RTLMFSATVPKPIAQLAKRFQNNALRITVQSETSQHADIDYVAMPVPPHERDHAIINTLL
YYDSQNSIIFCSTREAVKHMASRLSNRGFAVVALSGELSQAERNNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPTNPDTLLHRSGRTGRAGRKGTCVLVVPFSRRRSAERLL
HMAKLDAQTVPAPSIAAVQAKTNERILNAKVFNQPVEEEYQELLKALAERYTPEQIASAF
LNREVASYPAAEEVSDAPVHPVGGKKPRSDRFEKGDRYERGERRERGEPGERFDRNARFD
GVWFSVSAGRKHRADPKWLLPLICKAGDVSKRDVGSIKIFDNETRFEIAASKADEFRQSV
AERGTGEKSLVIRTAVAGAGGDAAARESRGSFKPRSDKFKEGGFRDGHKSDKPRDFSRGD
DFKKDGFKKGGKKPEGGSYSKKRRGE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcctgataccatcgctccggctctctccggagcattaaccgctcgcggttac
aatacgcttaccgctgttcagaatgctgttctggcccccgaaacactcgcttccgatctt
cttgtgtctgcccagacggggtctggcaagacggtggcttttggccttgccatggccaac
accattctcgaagacgaactgtgcttcggtgatgcgggtgcgccacttgccatgattatc
gcgccgacgcgcgaacttgcacttcaggtgcgccgtgaactggaatggctttatgccgat
accggcgcgcggattgcatcctgcgttggtggcatggatatccgcactgagcgccgcgcg
ctggagcggggaagccatatcgtcgtcggtacgccgggccgcctgcgcgaccacattacg
cgcaatgcgctcgatatgtcgcaactgcgcgccatcgtgctcgatgaagccgatgaaatg
ctcgacatgggctttcgcgaagacctcgaatttatccttggcgaagcgccggaagaccgc
cgcacgctgatgttctcggcaaccgtgccaaagccgattgcccagcttgccaagcgtttc
cagaacaatgcattgcgcatcaccgttcagagcgaaaccagccagcatgccgatatcgat
tatgtcgccatgccggttccgccgcatgagcgtgaccatgcgatcatcaacacgctgctt
tattacgatagccagaactcgatcattttctgctccacccgtgaagcggtaaagcacatg
gcaagccgcctctccaatcgcggtttcgcggtggtggcgctttcaggtgagttgagccag
gctgagcgcaacaatgcgcttcaggccatgcgggacgggcgcgcccgcgtctgtgtggcg
accgacgttgccgcgcgcggcatcgacctgcccaatcttgatctggtcatccatgctgat
ctgccaaccaatccggatacgcttctgcatcgttctggccgtacgggccgcgcgggccgc
aagggcacctgcgtcctggttgtgccgttctcgcgccggcgcagtgccgaacgcctgttg
cacatggcaaagcttgatgcgcagacggttcccgcgcccagcattgctgccgttcaggcc
aagaccaatgagcgcattttgaatgcgaaagtcttcaaccagcccgttgaagaagaatat
caggaactgctgaaggcccttgccgagcgttacacgccagagcagattgcgagcgccttc
ctcaatcgcgaagtggcctcctatccggcggcggaagaagtatccgatgcgccggtgcat
ccggttggcggcaagaagccgcgttcggaccgttttgaaaagggtgatcgttatgagcgc
ggcgaacgccgtgagcgtggcgaaccgggcgaacgcttcgaccgcaatgcgcgttttgat
ggcgtctggttttcggtttcggctggccgcaagcaccgcgccgatccgaaatggctgctg
ccgctcatctgcaaggcgggtgacgtatccaagcgcgatgtcggctcgatcaagattttc
gacaatgaaacgcgctttgaaattgcggcatccaaggcggatgaattccgccagtcagtg
gctgaacgcggcacgggcgaaaagagtctcgtaatccgcaccgccgttgctggcgctggc
ggcgatgctgctgcgcgtgagagccgtggtagcttcaagccacgtagcgacaagttcaag
gaaggcggcttccgggacggccacaagagcgataagccgcgcgatttttcccgcggtgat
gacttcaagaaagacggcttcaaaaagggcggtaaaaaacccgaaggtggcagttacagc
aagaagcgtcgcggtgaataa
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