Bradyrhizobium sp. SK17: CWS35_05510
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Entry
CWS35_05510 CDS
T05325
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWS35_05510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brk03400
]
CWS35_05510
Enzymes [BR:
brk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CWS35_05510
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CWS35_05510
DNA repair and recombination proteins [BR:
brk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CWS35_05510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AUC93813
LinkDB
All DBs
Position
complement(1194296..1195177)
Genome browser
AA seq
293 aa
AA seq
DB search
MPELPEVETVRRGLQPAMEGSKILKAEARRKDLRFPFQKDFIARLEGQTITGLGRRAKYL
MADLNSGDVLLMHLGMSGSFRVLKQEGAATPGQFHHPRSDDRAHDHVVFHMSSGAAVVFN
DPRRFGYMKIIARNAIEDEPLLKGLGPEPLGNEFDAAMLARSCHNKKTSLKAALLDQRVV
AGLGNIYVCEALFRSHLSPRRLAATLATKKAEPTDHAKRLVDAIHSVLNQAIKAGGSSIN
DHRLTNGDLGYFQHSFQVYDREGETCRTAGCEGIVKRFTQNGRSTFWCPKCQK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacccgaagtcgagaccgtccgccgcggcctgcaaccggccatggagggc
tccaaaatcctcaaggccgaggcccgccgcaaggatctgcggtttccgtttcaaaaagac
tttatcgcccggctcgagggtcagaccatcaccgggctcggccgccgcgccaaatatctg
atggcggacctgaactccggcgacgtgctgctgatgcatctcggcatgtcgggctcattc
cgcgtcctgaagcaggagggcgcggcgacaccggggcaattccaccatccgcgcagcgac
gaccgtgcgcacgatcatgtcgtgttccacatgtcctcgggcgcggcggtcgtgttcaac
gatcccaggcgcttcggctacatgaagatcatcgcccgcaacgcgatcgaggacgagccg
ctgctgaaggggctcgggcccgagccgctcggcaacgaattcgacgcggcgatgctggcg
cgctcctgccacaacaagaagaccagcctgaaggcggcgctgctcgatcagcgcgtggtg
gcgggacttggcaacatctatgtctgcgaggcgctgtttcgctcgcatctgtcgccgcgg
cgattggccgcgacgctcgcgaccaagaaggccgagcccaccgatcatgccaagcggctg
gtcgatgcgatccattcggtgctcaaccaggcgatcaaggccggcggctcctcgatcaac
gaccatcgcttgaccaatggcgatctcggctacttccagcattcgttccaggtctacgac
cgcgaaggcgagacatgccgcacggcgggttgcgagggcatcgtcaagcgcttcacccag
aacggccgttcgacgttctggtgcccgaaatgtcagaagtga
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