Bradyrhizobium sp. SK17: CWS35_05570
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Entry
CWS35_05570 CDS
T05325
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brk
Bradyrhizobium sp. SK17
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brk03400
]
CWS35_05570 (addB)
Enzymes [BR:
brk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWS35_05570 (addB)
DNA repair and recombination proteins [BR:
brk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CWS35_05570 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AUC93824
LinkDB
All DBs
Position
1208486..1211632
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AA seq
1048 aa
AA seq
DB search
MRVFSVPVSVPFLRTVISALVDGRLVAGFEARNDPAKLANATLYLPTRRAGRLAREIFLD
VLDSDAAVLPRIVALGDIDEDELAFADQTDDVGGAAPLEIPPRLGELERRLTLAHLVAAW
AKTPVSAPLVVGGPASTLQLAGDLARLMDDMVTRGVDWRALDRLVPDQLDRYWQHSLDFL
RIARDAWPNYLKEIGRIEPAARRDILIEAEAARLAAHHAGPVIAAGSTGSMPATAKFLHV
VAKLPNGAVVLPGLDTDLDEASWDTIGGERGDDGRFTLPPSSNHPQFAMHALLDRFGIKR
RDVENLAAPAPLGREVLVSETMRPSTATAQWHDRLERPEIVARISAGMTNLTVVEAPNPE
MEALAIAVAMREARHLGKSAALVTPDRALARRVMASLTRWKLEFDDSGGDALMETSAGVF
ARLAAEAAAKGLEPPTLLALLKHPLFRLGGAHGALRRAIEVLEIALLRGTRPQPGTGGLA
RDFARFRAELVKLHGGETSSLHAMEPRARLRDDELNQAEHLITRLQAALAPLERMASSKQ
HDFAELAARHREALIALSADHDGVAIVFEERAGAALASAFDELLAKQQPSGLMTPLSDYP
EVFQTAFADRMVRRPESARAQLNIFGQLEARLTESDRVILGGLVEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGHDEVILTHAAKVGGAPAVASRFLHRLEAVAGEA
RWKAATSAGETYVQYAAELDRPDKVEPMPQPEPRPPREARPLKMSVTAIEDWLRDPYTIY
ARYILKLDPLDPVDMPLSAADRGSAIHESLGEFTQVYADALPDDIKSALRDIGAKHFAPL
MERPEARALWWPRFQRIAAWFAEWEQARRGGIDAIKAEIRGEIGIPLDDARTFVLSARAD
RIERRDDGSFAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFADIAADSSVGDLVY
VRLSGNNPPGEQRSLELKIKTSDTPQPPDEAADSARRKLEALIRAFDDENQAYTSLNLSM
WANRYGAYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttcccgtttccgtgccattcctgcgcaccgtcatctcggcgttg
gtcgatggccggctggttgcgggattcgaggcgcgcaacgatccggccaagctcgccaac
gcgacgctgtatctgccgacccgccgcgccggccggctggcgcgcgaaatcttcctcgac
gtgctcgattccgatgccgcggtgctgccgcgcatcgttgcgctcggcgacatcgacgag
gacgagctggctttcgccgaccagaccgacgatgtcggcggcgccgcgccgctggagatt
ccgccacggctcggcgagctcgagcggcggctgaccttggcgcatctggttgccgcctgg
gccaagacgccggtgtcagcgccgctggtggtcggcggccccgcctccaccttgcagctc
gccggcgacctggcgcggctgatggatgacatggtgacgcgcggcgtcgactggcgcgcg
ctcgaccgcctggtgccggaccagctcgacaggtactggcagcattcgctcgacttcctg
cgcatcgcgcgcgacgcctggccgaactacctcaaggagatcggccggatcgagcccgcg
gcgcggcgcgatattctgatcgaggcggaagcggcgcggctcgccgcgcatcacgcaggt
ccggtgattgcggccggttcgaccggctcgatgccggcgaccgccaaattcctccacgtc
gtggcgaagctgccgaacggcgccgtggtgctgcccgggctcgacaccgatctcgacgaa
gcgtcctgggacacgatcggcggcgagcgcggcgacgatggccgcttcaccctgccgccg
tcgtcgaaccatccgcaattcgcgatgcacgctttgctcgaccgcttcggcatcaagcgc
cgcgatgtcgagaaccttgccgcccccgcgccgctcggccgcgaggtgctggtgtcggag
acgatgcgtccgtcgaccgcgaccgcgcagtggcacgaccggctcgaaaggcccgagatc
gtggcgcggatttccgccgggatgaccaacctcaccgtggtggaggcgcccaaccccgag
atggaggcgctggcgatcgcggtcgcgatgcgcgaagcccggcatctcggcaagtcagcc
gcgctggtgacgccggatcgcgcattggcgcgccgcgtgatggcttcgctgacgcgctgg
aagctggagttcgacgattccggcggcgacgcgctgatggaaacgtcggccggcgtgttc
gcccgcctcgccgcggaggccgcggccaagggactggagccgccgaccctgctcgcgctg
ctcaagcatccgctgttccggctcggcggcgcgcatggcgcgctgcggcgtgcgatcgag
gtgctggaaatcgcgctgctgcgcggcacgcgaccgcaaccggggaccggcggacttgcg
cgcgacttcgcgcgcttccgcgccgagctggtcaagctgcatggcggcgagacctcgtcg
ctgcacgcgatggagccgcgcgcccggctgcgcgacgacgagctcaatcaggccgagcac
ctgatcaccagattgcaggcggcgctggcgccgctcgaacgcatggcgtcgtcgaaacaa
catgatttcgccgagctggcggcgcgccaccgcgaggcgctgatcgcgctgtcggccgac
catgacggtgtcgccatcgtgttcgaggagcgcgccggcgcggcgctggcctctgccttc
gacgagctgctcgccaagcaacagccgagcgggctgatgactccgctgtcggattatccc
gaggtgttccagaccgcgttcgccgaccgcatggtgcggcggccggaatcggcacgcgcg
cagctcaacatcttcgggcagctcgaggcgcgtctgaccgaatccgatcgcgtcatcctt
ggcggcctggtcgagggcgtctggccaccggcgccgcggatcgatccgtggctgagccgg
ccgatgcggcacgaactcgggctcgatcttcccgagcggcgcatcggcctgtccgcgcac
gacttcgcgcaactgctcggccatgacgaggtgatcctcacccatgccgccaaggtcggc
ggcgcgccggcggtcgcctcgcgcttcctgcaccggctcgaagcggtggcgggcgaagcg
cgctggaaggccgcgacatcggccggcgaaacttacgtgcaatatgccgccgagctcgac
cggcccgacaaggtcgagccgatgccgcagccggagccgcggccgccgcgcgaggcgcgg
ccgctgaagatgtcggttaccgcgatcgaggactggctgcgcgacccctacacgatttac
gcgcgctatatcctcaagctcgatccacttgatcccgtcgacatgccgctgtcggcggcg
gatcgcggctccgcgatccacgaatcgctcggtgaattcacgcaggtttacgccgacgcg
ctgcctgacgacatcaagagcgcgttgcgcgacatcggggccaagcattttgcgccgctg
atggagcggccggaggcgcgcgcgctgtggtggccacgcttccagcgcatcgcggcgtgg
ttcgccgaatgggagcaggcgcggcgcggcggcatcgacgccatcaaggccgagatccgc
ggcgagatcggcattccgctcgacgatgccaggacatttgtgctctccgcgcgcgccgac
cgcatcgagcggcgcgacgacggcagctttgcgatcctcgactacaagaccggccagccg
ccgaccggcaaacaggtgcgcatggggctgtcgccgcagctgacgctggaggccgcgatc
ctgcgcgagggcggcttcgccgacattgcggccgactcttcggtcggcgacctcgtctat
gtcagactgagcggcaacaatccgccgggcgagcagcgttcgctggaattgaagatcaag
accagcgacacgccgcagccgcccgatgaagccgccgacagcgcgcggcgcaagctggaa
gccctgatccgcgccttcgacgacgagaaccaggcctacacctcgctgaacctctcgatg
tgggcgaaccgctacggcgcctatgacgaccttgcgcggatcaaggaatggtccgccgcc
ggtggcctggggatcgaggaatggtga
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