Bradyrhizobium sp. SK17: CWS35_08875
Help
Entry
CWS35_08875 CDS
T05325
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk00061
Fatty acid biosynthesis
brk00071
Fatty acid degradation
brk01100
Metabolic pathways
brk01212
Fatty acid metabolism
brk02024
Quorum sensing
brk04146
Peroxisome
Module
brk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CWS35_08875
00071 Fatty acid degradation
CWS35_08875
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CWS35_08875
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWS35_08875
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
brk01004
]
CWS35_08875
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brk04147
]
CWS35_08875
Enzymes [BR:
brk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CWS35_08875
Lipid biosynthesis proteins [BR:
brk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CWS35_08875
Exosome [BR:
brk04147
]
Exosomal proteins
Exosomal proteins of breast milk
CWS35_08875
Exosomal proteins of breast cancer cells
CWS35_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AUC99473
LinkDB
All DBs
Position
1888322..1889923
Genome browser
AA seq
533 aa
AA seq
DB search
MDNLLATGGVTGPGRIGRVAIGDLLKRAARRFSDRVALTDGNRQVTFTELERDANRFANH
LVQRGLKPGEKISTICNNSVELVKALFGIHRAGLVWVPINTMLGPADMDYILGHAEVRFA
IIDDNLHAQPDRRAALEARGMEMIAVDLTGHAEKTGLEEFNGLLAGRSDIEPEIEINDRD
LAMIIYTSGTTSRPKGAMHCHLAVVMAVMSNCIEMQLSRDDGITGQFPLFHCAGHVLLLS
YLSVGGRMALMRGFDPVVCMEAIARDRLTVFVGLSLMYQAILDHPRRREYDLSVLRCCIY
TMAPMGKPLLERAIADLCPNFVLTSGQTEMYPATTMSRPEVQLDRFGNYWGESLVVNETA
IMDDNGNLLPRGEIGELVHRGPNVMMGYYKDPKSTEEARKFGWHHTGDLALIDGNGEVLF
LDRKKDMIKSGGENVASVKIEETLLAHPAVQNAAVVGLPHPQWGEAVSAFVKLKPGAVAD
EAGIEAHCRKHLGGFQVPKLVRILEEMPMTATGKLRKVELRQQYSEHFVEKSA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctcttggcaaccggcggcgtcacgggcccgggccgcatcgggcgggtcgcg
atcggcgacctgctgaagcgtgccgcgcggcggttttcggatcgcgtcgcgctgaccgat
ggcaacaggcaagtcaccttcaccgagctcgagcgcgacgccaatcgcttcgccaaccat
ctggtgcaacgtgggctgaagccgggcgaaaagatctcgaccatctgcaataactccgtc
gagttggtcaaagcgctgttcggcatccaccgggccggcctggtctgggtgccgatcaac
accatgctcggcccggcggacatggactacatcctcggccatgccgaggtccgcttcgcc
atcatcgacgacaacctccatgcccagcccgaccgccgcgccgcgctggaagcgcgtggc
atggaaatgatcgcggtcgacctgaccggccatgcggaaaagaccggattggaggaattc
aacggcctgctggcgggccggtctgacatcgagcctgagatcgagatcaacgaccgcgat
ctcgcgatgatcatctacacgtcgggtacgacgtcgcggccaaagggcgcgatgcattgc
catctcgccgtggtcatggccgtgatgagcaactgcatcgagatgcagctgtcgcgcgac
gacgggatcactgggcaattcccgctgttccattgcgccggccatgtgctgctgctcagc
tatctctcggtcggcggccgcatggcgctgatgcgcggcttcgatccggtggtctgcatg
gaggcgatcgcccgcgacaggctcacggtgttcgtcgggctgtccttgatgtaccaggcg
atcctcgatcatccgcgccggcgcgagtacgacctgtcggttcttcgctgctgcatctac
accatggcgccgatgggcaagccgctgctcgaacgcgccatcgctgatctctgtccgaat
ttcgtgctgaccagcggccagaccgagatgtatccggcgacgacgatgtcgcgcccggag
gtgcagctcgaccgtttcggcaattactggggcgaatcgctcgttgtcaacgagaccgcg
atcatggacgacaacggcaatctgctgccgcgcggcgagatcggcgagctggtgcatcgc
ggccccaatgtgatgatgggttactacaaggacccgaagtcgaccgaggaggcacgcaag
ttcggctggcatcataccggcgatctcgctttgatcgacggcaatggcgaggtgctgttc
ctcgaccgcaagaaggacatgatcaagtcgggcggcgagaacgtcgcctccgtcaagatc
gaggagacgctgctcgcgcatcccgcggtgcagaacgccgccgtggtcgggctgccgcat
ccgcaatggggcgaggcggtctcggccttcgtcaagctgaagcccggcgcggtggccgac
gaggccggcatcgaggcgcattgccggaagcatctcggcggcttccaggtgccgaaactg
gttcgtatcctggaggagatgccgatgaccgcgaccggcaagctgcgcaaggtcgaactg
cggcagcagtatagtgagcattttgtggagaagagcgcgtga
DBGET
integrated database retrieval system