Bradyrhizobium sp. SK17: CWS35_09745
Help
Entry
CWS35_09745 CDS
T05325
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
brk
Bradyrhizobium sp. SK17
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brk03000
]
CWS35_09745
Transcription factors [BR:
brk03000
]
Prokaryotic type
Helix-turn-helix
Other families
CWS35_09745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
AAA_5
HTH_23
HTH_28
Mg_chelatase
HTH_17
HTH_20
HTH_29
HTH_30
HTH_22
HTH_7
HVO_A0261_N
PAS_4
IclR_C
AAA
nSTAND6
AAA_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
AUC94518
LinkDB
All DBs
Position
complement(2073660..2075525)
Genome browser
AA seq
621 aa
AA seq
DB search
MANLSASNHVARVLSAANQMAGVDTEARIAASWRRCVVNHNLDPARRGPPQTLTEAEVRH
IAEPMEDLIQVAVPELEDLARLLHDSGYCVNLADPNATMLVSRLPGGDYERMFLEWKIYT
GSNFAETFEGTNGLGTALAEQRPIIVHGDEHFREQWHMFTCAVSPLFDHAGRLAGAVNIS
SCRSDLGRGAHELALAVTTDATRRIEQSFFRRRYRASWIATLPGDGHGMLAYDDDRRVVG
ACRTARGVFGLTDAMIDDGIDLSHLIQLDDRATRAADEPVTLRRADGTPWGRGRIAPPVR
TRVSRPLPAPPREQPAGQFSGLHRLAGRDPVLIKGVKRLMTVGNLDLPILLHGETGAGKD
VFARAIHAASNRAGRNYVALNCAAMPESLIDAELFGYEAGAFTGARREGSKGLIVQASGG
TLFLDEIGDMPLALQTRLLRVLENREVWPLGALKPVPVDIRLISATHRDLARMAEHGSFR
SDLYYRLRGMEIRLPALRERADRKDVIAQIADEEAPHCRIAADAWAELMAYPFPGNMRQL
RHVLRLAGATAEAGVITGADLDLPTLGKTTAEAGHAASERAAIVEALRAHGGRVAEAAKT
LRISRATLYRKIKGLKIDAAS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctttcggcctcaaatcacgtcgcccgtgttttgtcggcggccaaccaaatg
gccggcgtcgacaccgaggcgcggattgctgcgtcgtggcggcgctgcgtggtcaatcac
aacctcgatccggcccggcgcgggccgccgcagaccctgaccgaggccgaggtccggcac
atcgccgagccgatggaggatctgatccaggtcgcggtcccggagctcgaggaccttgcc
cgcctgctccacgatagcggctattgcgtcaacctcgccgatcccaacgccaccatgctg
gtgagccggctgcccggcggcgactacgagcggatgttcctggagtggaagatctacacc
ggctcgaacttcgccgagactttcgaaggcaccaacgggctcggcaccgcgctcgccgag
cagcgaccgatcatcgtccacggcgacgagcatttccgcgagcagtggcacatgttcacc
tgtgcggtgtcgccattgttcgaccatgccggcaggctcgccggcgccgtcaacatctcc
tcctgccgcagcgatctcggccgcggcgcgcatgaactggcgttggccgtcaccacggac
gcgacgcggcggatcgagcagtcgttcttccgtcggcgttaccgcgcctcctggatcgcg
accctgcccggcgacgggcatggcatgctggcctatgacgacgaccgccgcgtcgtcggc
gcctgccgcaccgcgcgcggcgtgttcgggctgacggacgcgatgatcgacgacggcatc
gacctgtcgcatctcatccaactggacgatcgcgcgacgcgggccgccgacgagccggtc
acgttgcgccgcgccgacggcacgccgtggggccgcgggcgcatcgcaccgccggtgcgc
acgcgtgtctcccgtccgctgccggctccaccgcgcgagcaaccggccggacagttcagc
ggcctgcaccggctggcgggccgcgatcccgtgctgatcaagggcgtgaagcggctgatg
acggtcggcaatctcgacctgccgatcctgctgcatggcgagaccggcgccggcaaggac
gtgttcgcgcgcgccatccatgccgccagcaaccgcgccggccgcaactacgtcgcgctg
aattgcgcggcgatgccggagagcctgatcgacgccgagctgttcggctacgaggccggc
gccttcaccggcgcgcggcgcgagggatcgaaggggctgatcgtgcaggccagcggcggc
actttgttcctcgacgagatcggcgacatgccgctggcgctgcaaacacggctgctgcgc
gtgctggaaaaccgcgaggtctggccgctcggcgcgctgaagcccgtgccggtcgacatc
cgcctgatcagcgccacgcatcgtgacctggcgcggatggccgaacacggcagcttccgc
tccgacctgtattaccggctgcgcggcatggagatccgactgcccgcgctgcgcgagcgc
gccgaccgcaaggacgtcatcgcgcagatcgccgacgaggaggcgccgcactgccgcatc
gcggcggacgcctgggccgagctgatggcctatccgttccccggcaacatgcgccagctc
cgccatgtgctgcgcctcgccggcgcgaccgccgaagccggcgtcatcaccggagccgat
ctcgatttgccgacgcttggcaagacgaccgctgaggccggtcatgccgcgagcgagcgc
gcagcgatcgtcgaggcgctgcgcgcgcatggcgggcgggtggctgaagcggccaagacg
ctcaggatcagccgcgccacgctgtatcgcaagatcaagggactgaaaatcgacgccgca
tcgtga
DBGET
integrated database retrieval system
