Bradyrhizobium sp. SK17: CWS35_09970
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Entry
CWS35_09970 CDS
T05325
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk03030
DNA replication
brk03410
Base excision repair
brk03420
Nucleotide excision repair
brk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWS35_09970
03410 Base excision repair
CWS35_09970
03420 Nucleotide excision repair
CWS35_09970
03440 Homologous recombination
CWS35_09970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brk03032
]
CWS35_09970
03400 DNA repair and recombination proteins [BR:
brk03400
]
CWS35_09970
Enzymes [BR:
brk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWS35_09970
DNA replication proteins [BR:
brk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CWS35_09970
DNA repair and recombination proteins [BR:
brk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CWS35_09970
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWS35_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUC94558
LinkDB
All DBs
Position
complement(2125349..2128411)
Genome browser
AA seq
1020 aa
AA seq
DB search
MPKTASKDPAKPAEKPAPKTAKPAAAKPVASKPAAKGDHIFLVDGSGYIFRAYHALPPLN
RKSDGLQVNAVLGFCNMLWKLLRDMPEDNRPTHLAIIFDKSEITFRNKLYPDYKAHRPPA
PDDLIPQFALIREAVRAFDLPCLEQVGFEADDLIATYARLASERGASTTIVSSDKDLMQL
VSDKVLMYDTMKDRRIGRDEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGVKTAAQL
IIEYGDLDQLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVDLEVPLDDLAVHEP
DARKLVAFLKAMEFSTLTRRVADYAQIDPANVDADPGNKSGASVFSPLPPSDVTPAQGDA
PASAAAPAARAKPTGARDDKNSSLKGTPAALAEARGEAIRKTGFDRKAYQAISSLDQLNA
LIARAHDAGYLAIEAMSESIDPMQAELAGLALAVAPNDACYVPLGHREAGGGAGLFDAGL
APGQIKTADVLTALKPLLESAGIQKVGFNVKFTSVTLAQHGITLRNIDDAQLMSYALDAG
RGSHALEQLAERWFGHAVVNYGGLVGSGKGKLTFDQVTIDKATEYAAESADVILRLWRVL
KPRLVAERMTTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEI
AGEPVNVGSPKQIGDIIFGKMGLPGGTKTKTGAWSTTAQVLDDLAEQGHEFPKKILEWRQ
VSKLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRA
FIATPGHKLVSADYSQIELRLLAEIADVPVLRQAFRDGLDIHAMTASEMFGVPIKDMPSE
VRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETKDFCRRN
GYVTTLFGRKMYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMIRVEDALAEKKL
SAQMLLQVHDELIFEVPDNEVAATLPVVQKVMQDAPFPAVLLSLPLQVDARAANNWDEAH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacagcctccaaagaccccgccaagccagctgaaaagcccgctccgaagacc
gccaaacccgccgctgccaagccggttgcgagcaagccggcggccaagggcgaccatatc
tttctggtcgacggctcgggctacatcttccgcgcctatcacgcgctgccgccgctcaac
cgcaagtccgacggcttgcaggtcaacgccgtgctcggcttctgcaacatgctgtggaag
ctcttgcgcgacatgccggaggacaaccggccgactcatctcgcgatcatcttcgacaag
tccgagatcaccttccgcaacaagctctatccggattacaaggcgcaccggccgccggcg
ccggacgatctgatcccgcaattcgcgctgatccgcgaggcggtgcgcgccttcgacctg
ccctgtctcgaacaggtcggcttcgaggccgacgatctgatcgcgacctatgcgcggctc
gccagcgagcgcggcgcatcgacgaccatcgtctcctccgacaaggacctgatgcagctc
gtctccgacaaggtcttgatgtacgacaccatgaaggatcgccgcatcggccgcgacgag
gtgatcgagaagttcggcgtgccgccggagaaggtggtcgaggtgcaagcgctggccggc
gattccaccgacaacgtgcccggcgtgcccggcatcggcgtcaagaccgccgcacagctg
atcatcgaatatggcgacctcgatcaactgctgttccgcgccggcgagatcaagcagccg
aagcggcgcgaggcgctgctggagaatgccgagaaggcgcgcatctcgcgccagctcgtg
ctgctcgacgacaaggtcgacctcgaggtgccgctcgacgacctcgcggtgcacgagccc
gacgcgcgcaagctggtcgccttcctcaaggcgatggagttctccaccctcacccgccgc
gtcgccgactacgcgcagatcgacccggccaacgtcgacgccgatcccggcaacaagagc
ggcgccagtgtgttctcgccgctgccgccgtcggatgtcacgccggcacaaggcgatgca
cccgcatcggccgcggcaccggccgcgagagccaagccgaccggtgcgcgcgacgacaag
aactccagcctgaagggcacgccggccgcgctggccgaggcccgcggcgaagcgatccgc
aagaccggcttcgatcgcaaggcgtatcaggcgatcagtagcctcgaccagctcaacgcc
ttgatcgcccgcgcgcatgacgccggctatctcgcgatcgaggcgatgtcggaatcgatc
gacccgatgcaggccgagctcgcgggactggcgctcgcggtggcgcccaacgacgcctgc
tacgtgccgctcggccaccgggaggccggcggcggcgcgggcctgttcgacgccggcctc
gcgcccggccagatcaagaccgccgacgtgctgacggcgctgaagccgctgctggagtcc
gcaggcatccagaaggtcggcttcaacgtcaagttcacgtcggtgacgctggcgcagcac
ggcatcacgctgcgcaacatcgacgatgcgcagctgatgtcctatgcgctcgatgccggc
cgcggctcgcacgcgctggaacagctcgccgaacgctggttcggccatgccgtcgtcaat
tacggcggcctcgtcggcagcggcaagggcaagctgaccttcgaccaggtcacgatcgac
aaggcgaccgaatacgccgccgaaagcgccgacgtgatcctgcggctgtggcgcgtgctg
aagccccgcctcgtcgccgagcggatgaccactgtctacgagacgctggagcggccgctg
gtgtcggtgctggcgcggatggagcgccgcggcatctcgatcgatcgccaggtcctctcg
cgcctctcgggcgatttcgcgcagaccgcggcgcgcgtcgaggccgagatccaggagatc
gccggcgagccggtcaatgtcggcagccccaaacaaatcggcgacatcatcttcggcaag
atgggattgcccggcggcaccaagaccaagaccggcgcgtggtcgaccaccgcacaggtg
ctcgacgatctcgccgagcagggccacgaattcccgaagaagatcctggagtggcgccag
gtctcgaagctgaaatcgacctacaccgatgcgctgccaacctatgtcaatccgcagacc
catcgcgtccacaccacctacgcgctggccgcgaccaccacgggacggctgtcgtcgaac
gagccgaacttgcagaacatcccggtgcgcaccgaggatggccgcaagatccggcgcgcc
ttcatcgcgacgccgggccacaagctggtgtcggccgattactcccagatcgaattgcgg
ctgctcgccgagatcgccgacgtgccggtgttgcgccaggcgttccgcgacgggctcgac
attcacgcgatgacagcatcggagatgttcggcgtgccgatcaaggacatgccgagcgag
gtgcgccgccgcgccaaggcgatcaacttcggcatcatctacggcatctcggcgttcggc
ctcgccaaccagctcggcatcgcgcgcgaggaagcctcggcctacatcaagaaatacttc
gagcgcttccccggcatccgcgcctatatggacgagaccaaggatttctgccgccgcaac
ggctatgtgacgacgctgttcggccgtaagatgtactaccccgacatcaaggcctccaac
gcctcggtgcgcgcgttcaacgaacgcgccgcgatcaacgcgcgcttgcagggcaccgcg
gccgacatcatccgccgcgccatgatccgggtcgaggacgcgctcgccgagaagaagctc
tcggcgcagatgctgttgcaggtgcatgacgaactgatcttcgaggtgcccgacaacgag
gtcgcggcgacactgccggtggtgcagaaggtgatgcaggacgcgccgttcccggccgtg
ctcctgtcgcttccgttgcaggtcgatgcgagagccgcgaacaattgggacgaggcgcat
tag
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integrated database retrieval system
