Bradyrhizobium sp. SK17: CWS35_12915
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Entry
CWS35_12915 CDS
T05325
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk02020
Two-component system
brk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CWS35_12915
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CWS35_12915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
brk02022
]
CWS35_12915
02035 Bacterial motility proteins [BR:
brk02035
]
CWS35_12915
Two-component system [BR:
brk02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CWS35_12915
Bacterial motility proteins [BR:
brk02035
]
Flagellar system
Flagellar assembly proteins
Others
CWS35_12915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA_16
AAA_3
AAA
AAA_19
AAA_2
Mg_chelatase
HTH_Tnp_ISL3
AAA_22
MCM
TIP49
HTH_30
AAA_7
nSTAND3
AAA_PrkA
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AUC95040
LinkDB
All DBs
Position
complement(2760131..2761516)
Genome browser
AA seq
461 aa
AA seq
DB search
MRLLIVGTLKGQLTTATKIAMDNGATVTHAEAAEQAMGVLRGGKGADLLLVDVGLDIRDL
VMRLEAEHIHVPIVACGISNDARAAVAAIHAGAKEYIPLPPDPELIAAVLGAVANDARDL
IWRDEAMGRVIKLAQQIAGSEASVMITGESGTGKEVLARYVHSRSARAKRPFISINCAAI
PEHLLESELFGHEKGAFTGAVARRIGKFEEATGGTLLLDEISEMDVRLQSKLLRAIQERV
IDRVGGTKPVPVDIRIIATSNRNLSEAVREGSFREDLLFRLNVVNLKIPPLRDRPADILE
LAQHFAKKYAEANGLPVRPISTEARQILTANRWQGNVRELENTIHRSVLMAQGDEIGPEA
ILTPDGDRLDLAKTAPAVAHATLAAEQVTRALVGRTVADVERDLILETLKHCLGNRTHAA
NILGISIRTLRNKLNEYADGGIPITPAGNGGGDYQRLATAG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttctcatcgttggcaccctgaagggccagctcacgaccgcgaccaagatcgcg
atggacaacggcgccacggtgacccacgccgaggcggccgaacaggcgatgggtgtgctg
cgcggcggcaagggtgccgacctgctgctggtcgatgtcggcctcgacatccgcgatctg
gtgatgcggctcgaggccgagcacatccacgtgccgatcgtcgcctgcggcatctccaac
gatgcccgcgccgcggtcgccgcgatccacgccggcgccaaggaatacatcccgctgccg
cccgatccagaactgatcgcggccgtgctcggcgcggtcgccaacgacgcgcgcgacctg
atctggcgcgacgaggcgatgggccgggtgatcaagctcgcgcagcagatcgcgggctcg
gaggcctcggtcatgatcaccggcgagtccggtaccggcaaagaggtgctggcgcgctat
gtccactcccgttcggcccgcgccaagcggccgttcatctcgatcaactgcgcggcgatc
cccgagcacctgctggaatccgaactgttcggccatgagaagggcgccttcaccggcgcg
gtggcgcgccgcatcggcaagttcgaggaagccaccggcgggacgctgctgctcgacgaa
atctccgagatggacgtgcgccttcaatccaaattgctgcgcgcaatccaggaacgcgtg
atcgaccgcgtcggcggcaccaagccggtcccggtcgacatccgcatcatcgcgacctcg
aaccgcaacctgtcggaggcggtgcgcgagggcagcttccgcgaggacctgctgttccgc
ctcaacgtcgtcaatctgaagattccgccgctgcgcgatcgtccggccgacatcctcgaa
ctggcgcagcacttcgccaagaaatatgccgaggccaacggcctgccggtgcgcccgatc
tcgaccgaagcccgtcagatcctgaccgcgaaccgctggcagggcaacgtgcgcgagctc
gagaacaccatccatcgctcggtgctgatggcccagggcgacgagatcggtcccgaggcg
atcctgaccccggatggcgaccgcctcgacctcgccaagaccgcgcccgcggtcgcgcac
gccacgctcgccgccgagcaggtcacccgcgcgctggtcggccgcaccgtcgccgacgtc
gaacgcgacctgatcctggaaacgctgaagcactgcctcggcaaccgcacccatgccgcg
aatatcctgggcatctcgatccgcacgctgcgcaacaagctgaatgaatatgccgacggc
ggcatcccgatcaccccggccggcaatggcggcggcgactatcagcggctggcgacggcc
ggctga
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