Bradyrhizobium sp. SK17: CWS35_14015
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Entry
CWS35_14015 CDS
T05325
Name
(GenBank) fatty-acid oxidation protein subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk00071
Fatty acid degradation
brk00280
Valine, leucine and isoleucine degradation
brk00310
Lysine degradation
brk00362
Benzoate degradation
brk00380
Tryptophan metabolism
brk00410
beta-Alanine metabolism
brk00640
Propanoate metabolism
brk00650
Butanoate metabolism
brk00907
Pinene, camphor and geraniol degradation
brk00930
Caprolactam degradation
brk01100
Metabolic pathways
brk01110
Biosynthesis of secondary metabolites
brk01120
Microbial metabolism in diverse environments
brk01200
Carbon metabolism
brk01212
Fatty acid metabolism
Module
brk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CWS35_14015
00650 Butanoate metabolism
CWS35_14015
09103 Lipid metabolism
00071 Fatty acid degradation
CWS35_14015
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CWS35_14015
00310 Lysine degradation
CWS35_14015
00380 Tryptophan metabolism
CWS35_14015
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CWS35_14015
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CWS35_14015
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CWS35_14015
00930 Caprolactam degradation
CWS35_14015
Enzymes [BR:
brk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CWS35_14015
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CWS35_14015
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CWS35_14015
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
Methyltransf_31
Sacchrp_dh_NADP
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
2-Hacid_dh_C
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Clp_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
AUC95240
LinkDB
All DBs
Position
3014177..3016324
Genome browser
AA seq
715 aa
AA seq
DB search
MHRWRAGRRDVDRDGVIMDSRIMDLLADRVLELGPKPTADSPYRNFKLTRDEDGIAWLLF
DRAGVSANTLSADLLEELDAIVSALESQRPTGLVVRSAKKSGFIAGADVNEFRGVSDPGA
VETQIGRAHAVIDRLEALRVPSVAVIHGFCLGGGLEVALACQMRIAIDDARFGFPEVMLG
LHPGLGGTVRFTELVNPMQAMTLMLTGKTIDARRAKSLGLVDAVTQERHVRNAVKDAVFG
RLKRAKPGALNSLLNLGPVRGLLASRMRSEAEKAAPRKHYPAPYALIDLWEKHAGNRTAM
LNAEKTSFAKLMVTPTAQNLIRVFFLREQMKKMAGSGNKVAHVHVIGAGAMGGDIAAWCA
NQDMRVTLADMKAEPIAGAMKRAAELFGKIMRKKIDQRDALDRLVPDMDGEGVRNADLII
EAVPEKLELKQKVYAGLEPKMKPGAILATNTSSIPLQDLRTTLARPERLLGLHFFNPVSR
LQLVEVVSHDGTDAAMLKEALAFVGAIDRLPLPVKSSPGFLVNRALTPYMLEAMMMLDEK
TDQRLIDAAAIEFGMPMGPIELADQVGLDICLDVGDMLRSKFGDTLPPTPAWLREKVARG
ELGRKTGKGFYTWKDGKAEKAPLPDTGPKVSDEMIDRLVLPISNVCVAALREGIVDNPDT
VDGAMIFGTGYAPFRGGPLNYARSRGVDNIVSTMQTLMRKFGGRFAPDTGWEGFK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtggcgggcagggcggcgcgatgttgatagagacggtgtgatcatggattca
cggatcatggaccttctcgccgatcgcgtgctcgaactcgggccgaagccgaccgccgac
agcccctacaggaatttcaagctgacccgcgacgaggacggcatcgcgtggctgctgttc
gaccgcgccggcgtcagcgccaacacgctgtcggccgacctgctcgaagagctcgacgcc
atcgtctcggcgctggaaagccagcggccgaccgggctcgtggtgcgctcagcaaaaaag
agcggcttcatcgccggtgccgacgtcaatgaattccgcggcgtaagcgatcccggcgcg
gtcgagacccagatcggccgggcgcatgcggtgatcgaccggctggaggcgctgcgcgtg
ccgtcggtcgcggtgatccacggcttctgcctcggcggcggcctcgaggtcgcgctggcc
tgccagatgcggatcgcgatcgacgatgcgaggttcggttttcccgaggtgatgctcggc
ctgcatcccggcctcggcggcaccgtgcggttcaccgagctggtcaacccgatgcaggcg
atgaccctgatgctgaccggcaagacgatcgatgcgcgccgcgccaaatcgctcggcctg
gtcgatgcggtcacgcaggaacgccacgtccgcaacgcggtcaaggatgcggtgttcggc
cggctgaagcgcgccaagccaggtgcgctcaactcgctgctcaatcttggtccggtcagg
ggcttgctcgcctcgcggatgcgcagcgaggccgagaaggcggcgccgcgcaagcactat
ccggcgccctatgcgctgatcgatctctgggagaagcacgctggcaatcgcacggcgatg
ctgaatgcggagaagacctcgttcgccaagctgatggtgacgccgacggcgcagaatctg
atccgcgtcttcttcctgcgcgagcagatgaagaagatggcaggctccggcaacaaggtt
gcgcacgtccatgtcatcggcgccggtgcgatgggcggcgacatcgccgcctggtgcgcc
aaccaggacatgcgggtcacgctcgccgacatgaaagccgagccgatcgcgggcgcgatg
aagcgcgccgccgagctgttcggcaagatcatgcgcaagaaaatcgatcagcgcgacgcg
ctcgaccggctggtccccgacatggacggcgagggcgtgcgcaacgccgacctgatcatc
gaggcggtgccggaaaagctcgagctgaagcagaaggtctatgccggcctcgaaccgaag
atgaagccgggcgcgatcctcgccaccaacacctcgagcattccgttgcaggatctgcgc
accacgttggcgcggccggagcggctgctcgggctgcatttcttcaatccggtgtcgcgg
ctgcaactcgtcgaggtcgtgagccatgacggcaccgacgccgcgatgctcaaggaggcg
ctcgccttcgtcggcgccatcgaccgcctgccgctgccggtgaagagctcgccgggcttc
ctcgtcaaccgtgcgctgacgccctacatgctggaagcgatgatgatgctggacgagaag
accgaccagcgtctgatcgacgccgccgcgatcgagttcggcatgccgatggggccgatc
gaactggccgaccaggtcggcctcgatatctgcctcgatgtcggcgacatgctgcgctcg
aagttcggggataccttgccgccgacgccggcctggctgcgggaaaaagtcgccaggggc
gagctcggccgcaagaccggcaagggcttctacacctggaaggacggcaaggccgagaaa
gcgccgctgccggacaccggcccgaaggtcagcgacgaaatgatcgaccgcctggtgctg
ccgatctcgaatgtctgcgtggccgctttgcgcgagggcatcgtcgacaatcccgacacg
gtcgacggcgcgatgatcttcggcaccggctatgcgccgttccgcggcggcccgctcaac
tatgcgcgcagccgcggcgtcgacaatatcgtgtcgacgatgcaaaccttgatgcgcaag
ttcggcggacgatttgcgccggacaccggctgggagggcttcaagtga
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