Bradyrhizobium sp. SK17: CWS35_23405
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Entry
CWS35_23405 CDS
T05325
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk03410
Base excision repair
brk03430
Mismatch repair
brk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWS35_23405 (recJ)
03430 Mismatch repair
CWS35_23405 (recJ)
03440 Homologous recombination
CWS35_23405 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brk03400
]
CWS35_23405 (recJ)
DNA repair and recombination proteins [BR:
brk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CWS35_23405 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CWS35_23405 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CWS35_23405 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
VEK-30
Motif
Other DBs
NCBI-ProteinID:
AUC96868
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Position
5107726..5109567
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AA seq
613 aa
AA seq
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MTPPATAIPIEAPQAFLGVTRSLTGKLWRDRLDMRGAARALAIVQRHNLPEMLARVLAGR
DVAIDEVADFLDPTIRKLMPDPYTVTEMEHAARRIADAAVRGEKVAIFGDYDVDGATSAA
LLTWHLRHCGLDPLIHIPDRIFEGYGPNVDAVRALAAKGATLLVTVDCGTTSIEPLAEAK
KLGMSVVVIDHHQTGDELPEVDALVNPNRPDDLSGLGHLAAVGLVFVTLVAVNRELRRRG
FWTSVMPEPDLLSMLHHVALGTVADVAPLIGLNRAFVAKGLIAMRRRDHVGHTALMDVAR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLEGDVSEAARIAAELDRLNNERRVIE
QAAEAQAEAEALASLGLEDKGAVIVTAAEGWHPGVVGLVAARLKEKFARPAFAIALEPGG
IGTGSGRSIGGVDLGRAVRQAVHDGLLMKGGGHAMAAGVTLRKEKLAEFRAYMESALAAD
VANSRHENELFIDGAVTARAVTPEFAATLNRAGPFGSANPEPVIALPSHQLVYADEVGQA
HLRLRFKSGDGSIVNGIAFRSIGQKLGSALTQNRGQQLHVAGSLAVDRWQGTERVQFRVL
DVAAPDQGPTVIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcccgccactgccatccccatcgaggcgccacaggcgttccttggcgtgacg
cggtccttgaccggaaagctctggcgcgaccggctggatatgcgcggggcggcgcgggcg
cttgcgatcgtgcagcggcacaatctgccggaaatgctggcgcgcgtgctggcggggcgc
gacgtcgcgatcgacgaggtcgccgacttcctcgacccgaccatccgcaagctgatgccg
gatccgtacacggtcaccgagatggagcatgccgccaggcgtatcgcggatgccgctgtc
cgcggcgaaaaggtcgcgatcttcggcgactatgacgtcgacggcgcgacctcggcggcg
ctgttgacctggcatctgcgccattgcgggctcgatccgctgatccacattccggaccgg
attttcgaaggctacgggccgaacgtcgacgccgttcgtgcgctggcggccaagggcgcg
acgctgctggtcacggtcgattgcggcaccaccagcatcgagccgttggcggaagcgaag
aagctcggcatgtcggtggtggtgatcgatcaccaccagaccggcgacgagttgcccgag
gtcgatgcgctggtgaatccgaaccggcccgacgatctctccgggctcggccatctcgcc
gccgtcggcctcgtgttcgtcacgttggttgcggtgaaccgcgagctgcgccggcgcggc
ttctggaccagcgtgatgccggagccagacctgctgagcatgctgcatcacgtagcgctc
ggcaccgtcgccgacgtcgcgccgctgatcgggctcaaccgcgccttcgtcgccaagggg
ctgatcgcgatgcgccgccgcgaccatgtcggccataccgcgctgatggatgtggcgcgc
ctgaacggtccgccggaggcctggcatctcggcttcatgctggggccgcggatcaatgcc
ggcggccgtatcggacgcgccgatctcggcgtccggctgctgctcgaaggcgacgtctcg
gaggcggcgcggatcgcggccgagctcgaccgcctcaacaacgaacgtcgcgtgatcgag
caggccgccgaggcacaggccgaagccgaggcgctggcttcgctcgggctcgaggacaag
ggcgctgtcatcgtcaccgcggcggaaggctggcatcccggcgtggtcgggctggtcgcg
gcgcggctgaaggagaagttcgcgcgtcccgcattcgcgatcgcgctcgagccgggcggc
atcggcaccggatcgggccgctcgatcggcggcgtcgatctcggccgagcggtgcgccag
gcggtgcacgatggcctcttgatgaagggcggcggccacgcgatggcggccggcgtcacg
ctgcgcaaggagaagctcgccgaattccgcgcctacatggaaagcgcgctggcagccgac
gtcgccaattcccgtcacgagaacgagctgttcatcgacggcgccgtgaccgcgcgcgcg
gtgacgccggaattcgccgcgacgctcaatcgcgcggggccgttcggcagcgccaatccg
gagccggtgatcgcgctgccgtcgcaccaactggtctatgccgacgaggtcgggcaggcg
catttgcggctgcgcttcaagtccggcgacgggtccatcgtcaacggtatcgcattccgc
tccatcggacagaagctcggcagcgccttgacgcaaaatcgcggtcagcaattgcacgtg
gcgggctctcttgcagtcgaccgttggcaaggcaccgaacgtgtgcaattccgtgtcctc
gacgtcgcggcgccggatcagggcccgacggtgatccgataa
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