Bradyrhizobium sp. SK17: CWS35_24515
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Entry
CWS35_24515 CDS
T05325
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk03420
Nucleotide excision repair
brk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CWS35_24515
03430 Mismatch repair
CWS35_24515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brk03400
]
CWS35_24515
Enzymes [BR:
brk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWS35_24515
DNA repair and recombination proteins [BR:
brk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWS35_24515
MMR (mismatch excision repair)
Other MMR factors
CWS35_24515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
RecR_HhH
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
AUC97056
LinkDB
All DBs
Position
complement(5320659..5322728)
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AA seq
689 aa
AA seq
DB search
MPDPANTAYLDALNSEQRRAVEHGVGKDCTVGAPLLVIAGAGSGKTNTLAHRVAHLIVAG
ADPRRILLMTFSRRAAAEMAGRVARIARRVLGDRASVMTDALNWTGTFHGIGARLLREFA
ERIALDPAFTIHDREDSADLMNLVRHDLGFSRTESRFPTKGTCLAIYSRCVNAEMLIEAV
LGQFFPWCSGWADQLKQLFGAYVEAKQRQSVLDYDDLLLYWAQMVTDTALAEEIGGRFDH
VMVDEYQDTNRLQSSILLALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPNQFSPAAE
IVTLDRNYRSTQPILSAANGVISLAKERFTKNLWTDRTSTRKPLLVTVRDEADQARYIVE
QVLANREEGALLKHQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDAAHVKDMLALL
RFTANPRDRVAGFRILHLLPGVGPASAQRVLDRMAEAADPIAALTALPAPPRAGADWRLF
VEAIENLRYSEWPVDIERARLWYEPHLDRIHEDSEVRRADLIQLEQIAAGYPSRERFLTE
LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVYVLNVVDGCMPSDLGAGTSAE
LEEERRLLYVAMTRAKDDLHLMVPQRFFVHGQAAKGDRHMYASRTRFIPERLLPIFERTT
WPRAAAGQASSANRAPPIDIGARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgatccagccaacacagcctatctcgatgcgctcaactccgagcaacgccgcgcc
gttgagcacggggtcggcaaggattgcaccgtcggcgccccgctgctggtgatcgccggc
gctggctccggcaagaccaatacgctcgcccaccgtgtcgcgcatctgatcgtcgcaggc
gccgatccgcgtcgtatcctgttgatgaccttttcgcgccgcgcggccgccgagatggct
ggccgcgtcgcgcgcatcgcacggcgggtgctcggtgaccgcgcctccgtcatgaccgac
gcgctgaactggaccggcacgttccacggcatcggcgcgcggctgttgcgcgaattcgcg
gaacgcatcgccctcgacccggcgttcacgatccatgatcgcgaggactccgccgatctg
atgaatctggtccgccacgatcttggtttctcacgcaccgaaagccggttccccaccaag
ggcacctgccttgcgatctattcgcgctgcgtgaacgcggagatgctgatcgaggccgtg
ctcggccagttctttccttggtgctccggctgggctgatcaattgaaacagctgttcggg
gcctatgtcgaagccaagcagcggcagagcgtgctcgattacgacgacctgctgctctac
tgggcacagatggtgacggacacggcgctggccgaagagatcggcggccgtttcgaccat
gtgatggtcgacgaatatcaggacaccaaccgcttgcagtcctcgatcctgctcgcgctc
aagcccggagggcgcggactgaccgtggtcggcgacgacgcgcagtcgatctattcattc
cgcgccgccacggtgcgcaatatcctcgacttcccgaaccagttcagcccggcggctgag
atcgtcacgctcgaccgcaattatcgctcgacgcagccgatcctgtcggcggccaatggc
gtgatctcgctcgccaaggaacgcttcaccaagaacctgtggaccgaccgcacctcgacc
cgcaagccgctgctcgtgacggtgcgcgacgaggccgatcaggcccgctacatcgtcgag
caggtgctggcgaaccgtgaggaaggcgcgctgttgaagcaccaggccgtgctgttccgc
acctcgtcgcacagcggcccgctcgaggtcgagctgacccgccgcaacatcccattcgtg
aaattcggcggccttaaattcctcgatgccgcgcacgtcaaggacatgctggcgctgctg
cgcttcaccgccaatccgcgcgaccgggtcgccggctttcgtatcctgcatctgctgccc
ggcgtcgggccggcctccgcgcagcgcgtgctcgaccgcatggccgaagccgccgatccg
atcgccgcgctcacggcgctgcccgcgccgccccgtgcaggcgccgactggcggttgttc
gtcgaggcgatcgagaacctccgctactctgaatggcctgtcgacatcgagcgcgcccgg
ctttggtacgagccgcatctcgaccgcattcacgaggacagcgaagttcgccgcgccgac
ctcattcaactcgaacagatcgccgccggctatccgtcacgcgagcgcttcctcaccgag
ctcacactcgatccgcccgacgcgaccagcgaccaggccggcgtgccgctgctcgacgaa
gattatctgatcctgtcgacgatccactccgccaaggggcaggagtggaaatcggtctat
gtgctcaacgtcgtcgacggctgcatgccgtccgacctcggtgccggcacatcagccgag
ctcgaggaagagcggcgcctgctctatgtcgcaatgacccgggccaaggatgatctgcat
ctcatggtgccgcagcgctttttcgtccacggccaggccgccaaaggcgaccgccacatg
tacgcctcgcgcacccgctttatcccggagcggctgcttccgatattcgagcggaccacc
tggccgcgcgccgccgccggacaggcttcatccgccaatcgggcaccgccgatcgacatc
ggtgcccggatgcgtggcatgtggcgctga
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