KEGG   Bradyrhizobium sp. SK17: CWS35_25555
Entry
CWS35_25555       CDS       T05325                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
brk  Bradyrhizobium sp. SK17
Pathway
brk00010  Glycolysis / Gluconeogenesis
brk00020  Citrate cycle (TCA cycle)
brk00260  Glycine, serine and threonine metabolism
brk00280  Valine, leucine and isoleucine degradation
brk00310  Lysine degradation
brk00380  Tryptophan metabolism
brk00620  Pyruvate metabolism
brk00630  Glyoxylate and dicarboxylate metabolism
brk00640  Propanoate metabolism
brk00670  One carbon pool by folate
brk00785  Lipoic acid metabolism
brk01100  Metabolic pathways
brk01110  Biosynthesis of secondary metabolites
brk01120  Microbial metabolism in diverse environments
brk01200  Carbon metabolism
brk01210  2-Oxocarboxylic acid metabolism
brk01240  Biosynthesis of cofactors
Module
brk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
brk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
brk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
brk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:brk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CWS35_25555 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CWS35_25555 (lpdA)
   00620 Pyruvate metabolism
    CWS35_25555 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CWS35_25555 (lpdA)
   00640 Propanoate metabolism
    CWS35_25555 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CWS35_25555 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CWS35_25555 (lpdA)
   00310 Lysine degradation
    CWS35_25555 (lpdA)
   00380 Tryptophan metabolism
    CWS35_25555 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CWS35_25555 (lpdA)
   00670 One carbon pool by folate
    CWS35_25555 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brk04147]
    CWS35_25555 (lpdA)
Enzymes [BR:brk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CWS35_25555 (lpdA)
Exosome [BR:brk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CWS35_25555 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 DAO FAD_oxidored FAD_binding_3 GIDA HI0933_like Lys_Orn_oxgnase AlaDh_PNT_C Thi4 2-Hacid_dh_C 3HCDH_N NAD_binding_7
Other DBs
NCBI-ProteinID: AUC97236
LinkDB
Position
complement(5538240..5539661)
AA seq 473 aa
MADTSFDVIIIGSGPGGYVTAIRAAQLGFKTAIVEKSYLGGICLNWGCIPTKALLRSAEI
YHYMQHAKDYGLSADNVSFDPKAVVQRSRGVSKRLNDGVGFLMKKNKVTVIWGDATIDAP
GKITVKKSAVEAPKGASGEGVYQAKHIIVATGARPRVLPGLEPDKKLIWTYFEAMVPERM
PKSLLVVGSGAIGIEFASFFHTMGSDVTVVEVLPQILPVEDAEIAGLARKRFEKMGIKIM
SSTKVTKLEKKADSVVATIDDGKGQPQTKEFERVISAVGVVGNIENLGLEKLGVKTDRGC
IVIDGLGKTNVPGIYAIGDVAGPPMLAHKAEHEGVICIEAIKGLHPHPMDKLLIPGCTYC
NPQVASVGLTEAKAKEGGREIRIGRFPFVGNGKAIALGEDQGLVKVVFDKKTGQLLGAHM
IGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMKEAVLDAYGRVLNI
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggccgacacatccttcgacgtcatcatcatcggctccggccccggcggctacgtcacc
gcgatccgcgccgcccagctcggcttcaagaccgcgatcgtcgagaaatcctatctcggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctcggccgagatc
taccattacatgcagcacgccaaggattacgggctgtcggcggacaacgtctcgttcgat
ccgaaggcggtggtgcagcgctcgcgcggcgtctcgaagcggctcaacgacggcgtcggc
ttcctgatgaagaagaacaaggtcacggtgatctggggcgacgccacgatcgacgcgccc
ggcaagatcacggtgaagaaatccgcggtcgaagcgccgaagggcgccagcggcgagggc
gtctatcaggccaagcacatcatcgtcgcgaccggcgcgcggccgcgcgtgctgcccggg
ctcgagcccgacaagaagctgatctggacctatttcgaggcgatggtgccggagcggatg
ccgaagtcgctgctggtggtgggctcgggcgcgatcggcatcgaattcgcctcgttcttc
cacaccatgggatccgacgtcaccgtggtcgaggtgttgccgcagatcctgcccgtcgag
gacgcggagatcgccgggctggcgcgcaagcggttcgagaagatgggcatcaagatcatg
tcctcgaccaaggtgacgaagctggaaaagaaggccgacagcgtggtcgcgaccatcgac
gacggcaagggccagccccagaccaaggaattcgagcgcgtgatctcggcggtcggcgtg
gtcggcaatatcgaaaatctcgggctggagaagctcggcgtcaagaccgaccgcggttgc
atcgtgatcgacggcctcggcaagaccaacgtccccgggatctatgcgatcggcgacgtc
gcaggacccccgatgctggcgcacaaggctgagcatgagggcgtgatctgcatcgaggcg
atcaagggcctgcatccgcatccgatggacaagctgctgatcccgggctgtacctattgc
aacccgcaggtcgcctcggttggcctcacggaagccaaggccaaggagggcggccgcgag
atccgcatcggccgcttcccgttcgtcggtaacggcaaggcgattgcgctcggcgaggac
cagggcctcgtcaaggtggtgttcgacaagaagaccgggcagttgctcggcgcgcatatg
atcggcgccgaggtgaccgagctgatccagggctatgtggtggcgatgaacctggagacc
acggaagaggaattgatgcacaccgtgttcccgcatccgaccttgtcggagatgatgaag
gaagcggtgctggatgcgtacggaagggtgctgaatatttga

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