Bradyrhizobium sp. SK17: CWS35_25555
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Entry
CWS35_25555 CDS
T05325
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk00010
Glycolysis / Gluconeogenesis
brk00020
Citrate cycle (TCA cycle)
brk00260
Glycine, serine and threonine metabolism
brk00280
Valine, leucine and isoleucine degradation
brk00310
Lysine degradation
brk00380
Tryptophan metabolism
brk00620
Pyruvate metabolism
brk00630
Glyoxylate and dicarboxylate metabolism
brk00640
Propanoate metabolism
brk00670
One carbon pool by folate
brk00785
Lipoic acid metabolism
brk01100
Metabolic pathways
brk01110
Biosynthesis of secondary metabolites
brk01120
Microbial metabolism in diverse environments
brk01200
Carbon metabolism
brk01210
2-Oxocarboxylic acid metabolism
brk01240
Biosynthesis of cofactors
Module
brk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
brk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
brk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
brk_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CWS35_25555 (lpdA)
00020 Citrate cycle (TCA cycle)
CWS35_25555 (lpdA)
00620 Pyruvate metabolism
CWS35_25555 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CWS35_25555 (lpdA)
00640 Propanoate metabolism
CWS35_25555 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CWS35_25555 (lpdA)
00280 Valine, leucine and isoleucine degradation
CWS35_25555 (lpdA)
00310 Lysine degradation
CWS35_25555 (lpdA)
00380 Tryptophan metabolism
CWS35_25555 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CWS35_25555 (lpdA)
00670 One carbon pool by folate
CWS35_25555 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brk04147
]
CWS35_25555 (lpdA)
Enzymes [BR:
brk01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CWS35_25555 (lpdA)
Exosome [BR:
brk04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CWS35_25555 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
NAD_binding_8
DAO
FAD_oxidored
FAD_binding_3
GIDA
HI0933_like
Lys_Orn_oxgnase
AlaDh_PNT_C
Thi4
2-Hacid_dh_C
3HCDH_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AUC97236
LinkDB
All DBs
Position
complement(5538240..5539661)
Genome browser
AA seq
473 aa
AA seq
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MADTSFDVIIIGSGPGGYVTAIRAAQLGFKTAIVEKSYLGGICLNWGCIPTKALLRSAEI
YHYMQHAKDYGLSADNVSFDPKAVVQRSRGVSKRLNDGVGFLMKKNKVTVIWGDATIDAP
GKITVKKSAVEAPKGASGEGVYQAKHIIVATGARPRVLPGLEPDKKLIWTYFEAMVPERM
PKSLLVVGSGAIGIEFASFFHTMGSDVTVVEVLPQILPVEDAEIAGLARKRFEKMGIKIM
SSTKVTKLEKKADSVVATIDDGKGQPQTKEFERVISAVGVVGNIENLGLEKLGVKTDRGC
IVIDGLGKTNVPGIYAIGDVAGPPMLAHKAEHEGVICIEAIKGLHPHPMDKLLIPGCTYC
NPQVASVGLTEAKAKEGGREIRIGRFPFVGNGKAIALGEDQGLVKVVFDKKTGQLLGAHM
IGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMKEAVLDAYGRVLNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacatccttcgacgtcatcatcatcggctccggccccggcggctacgtcacc
gcgatccgcgccgcccagctcggcttcaagaccgcgatcgtcgagaaatcctatctcggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctcggccgagatc
taccattacatgcagcacgccaaggattacgggctgtcggcggacaacgtctcgttcgat
ccgaaggcggtggtgcagcgctcgcgcggcgtctcgaagcggctcaacgacggcgtcggc
ttcctgatgaagaagaacaaggtcacggtgatctggggcgacgccacgatcgacgcgccc
ggcaagatcacggtgaagaaatccgcggtcgaagcgccgaagggcgccagcggcgagggc
gtctatcaggccaagcacatcatcgtcgcgaccggcgcgcggccgcgcgtgctgcccggg
ctcgagcccgacaagaagctgatctggacctatttcgaggcgatggtgccggagcggatg
ccgaagtcgctgctggtggtgggctcgggcgcgatcggcatcgaattcgcctcgttcttc
cacaccatgggatccgacgtcaccgtggtcgaggtgttgccgcagatcctgcccgtcgag
gacgcggagatcgccgggctggcgcgcaagcggttcgagaagatgggcatcaagatcatg
tcctcgaccaaggtgacgaagctggaaaagaaggccgacagcgtggtcgcgaccatcgac
gacggcaagggccagccccagaccaaggaattcgagcgcgtgatctcggcggtcggcgtg
gtcggcaatatcgaaaatctcgggctggagaagctcggcgtcaagaccgaccgcggttgc
atcgtgatcgacggcctcggcaagaccaacgtccccgggatctatgcgatcggcgacgtc
gcaggacccccgatgctggcgcacaaggctgagcatgagggcgtgatctgcatcgaggcg
atcaagggcctgcatccgcatccgatggacaagctgctgatcccgggctgtacctattgc
aacccgcaggtcgcctcggttggcctcacggaagccaaggccaaggagggcggccgcgag
atccgcatcggccgcttcccgttcgtcggtaacggcaaggcgattgcgctcggcgaggac
cagggcctcgtcaaggtggtgttcgacaagaagaccgggcagttgctcggcgcgcatatg
atcggcgccgaggtgaccgagctgatccagggctatgtggtggcgatgaacctggagacc
acggaagaggaattgatgcacaccgtgttcccgcatccgaccttgtcggagatgatgaag
gaagcggtgctggatgcgtacggaagggtgctgaatatttga
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