Bradyrhizobium sp. SK17: CWS35_25905
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Entry
CWS35_25905 CDS
T05325
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk03030
DNA replication
brk03430
Mismatch repair
brk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWS35_25905
03430 Mismatch repair
CWS35_25905
03440 Homologous recombination
CWS35_25905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brk03032
]
CWS35_25905
03400 DNA repair and recombination proteins [BR:
brk03400
]
CWS35_25905
Enzymes [BR:
brk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWS35_25905
DNA replication proteins [BR:
brk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWS35_25905
DNA repair and recombination proteins [BR:
brk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWS35_25905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
HROB
DUF6374
Motif
Other DBs
NCBI-ProteinID:
AUC97301
LinkDB
All DBs
Position
complement(5608252..5611776)
Genome browser
AA seq
1174 aa
AA seq
DB search
MPNAGFVHLHVHSAYSLLKGSIKIAKLGELAKADRQPALALTDTDNMFGALEFSDKMAGY
GIQPIVGCEVAVDFGDVDPNTRSILATTGPTRIVLLAARERGYQNLMRLNSRAFLETPVN
QTPHIKLDWLTDAAEDLIALTGGPDGPIALALRAEQAALATTRCERLASLFGDRLYVELQ
RHGIDKERRTEGGLIDLAYAKGLPLVATNEPYFASSDDYESHDALLCIAGGHLIAETNRE
QLTPDHRFKTRAEMAVLFADIPEALASTVEIAERCSFRPKTRKPILPFFTVGAAASADAA
ADEAAELKRQAEEGLVNRLRVHGLSPGMTEEDYSKRLAFELDVITRMKYAGYFLIVSDFI
KWAKAQGIPVGPGRGSGAGSLVAWVLTITDLDPMRFALLFERFLNPERVSMPDFDIDFCQ
DRRGEVIQYVQDRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPA
APVTLAQAIEGEPKLQAFRDEDPVVARAFDIAQRLEGLTRHASTHAAGIVIGDRPLSELV
PMYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTVLDVAVKLLKQRDVDVDLATLPI
DDAASYQMLARGDVVGVFQVESQGMRRALIDMRPDRFEDIIALVALYRPGPMANIPTYCA
RKHGDEESEYLHPILEPILKETFGVIIYQEQVMQIAQQMAGYSLGQADLLRRAMGKKIRA
EMDKQRDIFVAGAMKNGVAKGQAETIFELLAKFADYGFNKSHAAAYALVSYHTAYMKAHY
PVEFLAASMTLELNNTDKLSEFRSEAQRLGIKVEAPNINRSGATFEVSDNTIYYALAALK
GVGIQAVEQIIEERNKKGAFTSLADFAARVSPRAVNKRIIESLAAAGAFDTLDPNRARVF
AGADSILAACQRSHEAATSGQNDMFGSAPDAPSIMLPQVEPWLPADRLRREYDAIGFFLS
GHPLDDYATALKRLRVQSWAEFSRAVKTGATAGKVAATVVSRMERRTKTGNKMGIMGLSD
PTGHFEAVLFSEGLAQYRDVLEPGAAVLLQLGAELQGEDVRARVLHAEPLDHAAAKTQKG
LRIFVRDTKPLESIARRLNMPDAAPAPGGARPPAAKPAPAAAPPAGAADGDVSLVMMLDL
ETEVEMKLPGRYKVSPQIAGAIKAVAGVVDVQTL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatgccggattcgttcatcttcacgtccattccgcctattcgctgctgaagggc
tcgatcaagatcgccaagctcggcgagcttgcgaaggccgaccgccaaccggcgctggcg
ctgaccgacaccgacaacatgttcggggcgctggaattctccgacaagatggccggctac
ggcatccaaccgatcgtcggctgtgaggttgcggtcgatttcggcgacgtcgaccccaac
acgcgaagcatcctggcgaccaccggaccgacgcgaatcgtgctgctggcggcacgcgag
cgcggctaccagaacctgatgcggctgaactcgcgggcgttcctggagacgccggtgaac
cagacaccgcacatcaagctcgactggctcaccgacgccgccgaggatctgatcgcgctg
accggcggtccggacgggccgatcgcgctggcgctgcgtgccgagcaggcagcgctggcg
accacccgttgcgaacgactggccagcctgttcggcgaccgcctctatgtcgaattgcag
cgccatggcatcgacaaggagcgccgcaccgagggcgggctgatcgatctcgcctatgcg
aagggcctgccgctggtggcgaccaacgagccgtatttcgccagcagcgacgactacgaa
tcgcatgacgcactgctgtgcatcgccggcggccatctgattgccgagaccaaccgcgag
caattgaccccggatcaccgcttcaagacccgcgccgaaatggcggtgctgttcgccgac
atcccggaggcgttggcctcgacggtcgagatcgccgaacgttgctcgttccggccgaag
acccgcaagccgattctgccgttcttcaccgtcggtgccgccgccagcgcagatgccgcc
gccgacgaggccgccgagctgaagcgccaggccgaggagggcctcgtgaatcgcctgcgg
gtgcacggtctctcgccgggcatgaccgaagaggactacagcaagcgactcgccttcgag
ctcgacgtcatcacccgcatgaaatacgcgggctacttcctgatcgtgtcagacttcatc
aaatgggccaaggcgcagggcatcccggtcggaccgggccgcggctccggcgcgggctcg
ctggtcgcctgggtgctgaccatcaccgacctcgatccgatgcggttcgcgctgctgttc
gagcgcttcctcaatcccgaacgcgtctcgatgccggacttcgacatcgacttctgccag
gaccgccgtggcgaggtgatccagtacgtccaggaccgctatggccgcgaccaggtggcg
cagatcattaccttcggtacactgcaggcgcgcggcgtgctgcgcgacgtcgggcgcgtg
ttgcagatgccttacgggcaggtcgacaagctgaccaagctggtgccgcagaatcccgcg
gctcccgtgaccttggcgcaggcgatcgagggcgagcccaagctgcaagcgttccgcgac
gaggacccggtggtggcgcgcgccttcgacatcgcgcagcgcctcgaaggtctcacgcgg
cacgcctcgacccacgccgcgggtatcgtgatcggcgaccggccgctgagcgagctggtg
ccgatgtatcgcgatccgaaatccgacatgccggtcacccagttcaacatgaaatgggtc
gagcccgcgggtctcgtgaagttcgacttccttggcctcaagacgctgacggtgctcgac
gtcgcggtgaagctgctcaagcagcgcgacgttgatgtcgacctcgccacgctgccgatc
gacgatgcggcgagttaccagatgctggcgcggggcgatgtggtcggcgtgttccaggtg
gaaagccagggcatgcggcgcgcgctgatcgacatgcggccggaccgcttcgaggacatc
atcgcgctggtggcgctgtatcgcccgggtccgatggccaacatcccgacctattgcgcg
cgcaagcacggcgacgaggaatcggaatatctgcatccgatcctggagccgatcctgaag
gagacgttcggcgtcatcatctatcaggaacaggtgatgcagatcgcgcagcagatggca
ggctattcgctcggccaggccgacctgctgcgccgcgcgatgggcaagaagatccgcgcc
gagatggacaagcagcgcgacatcttcgtcgccggcgcgatgaagaacggcgtggcgaag
ggccaggcggagacgatcttcgaactgctcgccaagttcgccgactacggcttcaacaag
agccacgcggcggcctatgcgctggtgtcgtaccacaccgcctatatgaaggcgcattac
ccggtcgaattcctcgcggcgtcgatgacgctcgaactcaacaacaccgacaagttgtcc
gaattccgctccgaggcgcagcggctcggcatcaaggtcgaggcgcccaacatcaatcgt
tccggcgccaccttcgaggtcagcgacaacacgatctactacgcgctcgcggcgctgaag
ggcgtcggcatccaggccgtcgagcagatcatcgaggagcgcaacaagaagggcgccttc
acctcgctggccgacttcgctgcgcgggtcagcccgcgtgccgtcaacaagcggatcatc
gagagtctcgcggcggctggcgcgttcgacacgctcgatccgaatcgcgcgcgcgtgttc
gctggcgccgattcgatcctcgcggcgtgccagcgcagccacgaggcggccacgtcaggc
cagaacgacatgttcggcagcgcgccggatgcgcccagcatcatgttgccgcaggtcgag
ccgtggctgcccgcggatcgcctgcggcgcgaatatgacgcgatcggcttcttcctgtcg
ggccatccgctcgacgactacgccaccgcgctgaagcggctgcgggtgcagtcctgggcg
gaattttcgcgcgcggtgaagaccggcgcgaccgcgggcaaggtcgcggcaaccgtggtg
tcgcgcatggagcggcgcaccaagaccggcaacaagatgggcatcatgggcctgtccgac
ccgaccggccatttcgaggccgtattgttctccgaggggctcgcgcagtaccgcgacgtg
ctcgagccgggcgccgccgtgctgctgcaactcggcgcagaattgcagggcgaggacgtg
cgggcgagggtgctgcacgccgaaccgctggatcacgccgccgccaagacccagaagggg
ctgcgcatcttcgtgcgcgacaccaagccgctggagtcgatcgcccgccggctcaacatg
ccggatgccgcacccgcgccgggtggcgcaaggccgccggcggccaagcccgcaccggca
gccgcgccgccggcaggtgcagccgacggcgacgtctcgctggtgatgatgctcgacctc
gagaccgaggtggagatgaagctgcccggccgctacaaggtctcgccgcagatcgccggc
gcaatcaaggcggtcgcgggcgtggtcgacgtgcagacgctgtag
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