Bradyrhizobium sp. SK17: CWS35_28960
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Entry
CWS35_28960 CDS
T05325
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk02010
ABC transporters
brk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CWS35_28960
03070 Bacterial secretion system
CWS35_28960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brk02000
]
CWS35_28960
02044 Secretion system [BR:
brk02044
]
CWS35_28960
Transporters [BR:
brk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CWS35_28960
Secretion system [BR:
brk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CWS35_28960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_29
AAA_18
AAA_22
AAA_28
AAA_21
ABC_ATPase
MeaB
AAA_30
IRK
PRK
DUF87
Rad17
RsgA_GTPase
AAA_5
NB-ARC
nSTAND3
KAP_NTPase
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AUC97826
LinkDB
All DBs
Position
complement(6259902..6262028)
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AA seq
708 aa
AA seq
DB search
MEALSPDSGLQCLALLLRFHQVSVDPAQIAHQFAGRAIGVAEMLRCAKELKLKARAVKET
WTGLARLPLPAIVQRRDESFVIIGKVTENDILIQDPLEQRPQAIKRADFEANWNGAVVLM
TRRASLADLVRRFDITWFLQAMHKYRRLLAEVLVASFFLQLFALVTPLFFQVVTDKVLTH
RGFTTLDVLVIGLITVSIFETVLGALRTYVFSHTTNRIDVELGARLFRHLIALPIGYFEA
RRAGDSVARVRELENIRNFLTSSALTLVIDLAFTFVFLAVMFYYSPLLAWIVVGSFPFYI
ALSAGVTPIFRQRLERKFDRGAENQAFLVESVSGIQTLKAMAIEPQMQRRWEEQLAGYVG
SSFDVLSLGNWTSQAVQFISKIVTALTLYFGAHLVIEGQLTVGELIAFNMLAGRVAQPVL
RLAQLWQDFHQARVSIARLGDILNTTPEPTFDASRAALPPIQGNVTFEHIDFRYRLDAPL
ALHDVSLKVAAGQVIGIVGPSGSGKSTLTKLLQRLYVPEAGRVLIDGIDLTVADVAWLRR
QVGSVLQENVLFNRSIRDNIALADPGMPMERIIAAAELAGAHEFILGLPDGYNTVVGERG
ASLSGGQRQRIAIARALVTNPRILIFDEATSALDYESESIIQRNMRRISAGRTVFIIAHR
LSAVRHADRIITIEGGRLVEDGTHDELIKQAGRYATLHQIQAGLHVVA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgttaagtccggattcgggtctgcagtgtctcgcgcttcttctccggttccat
caggtctcggttgaccccgcacagattgcgcatcagttcgctggtcgcgcgatcggcgtt
gccgagatgttgcgttgtgcgaaggagttgaagctcaaggctcgtgccgtcaaggaaacc
tggacaggcctggcacgcttgccgctgcccgccatcgttcagcggcgagacgagagcttc
gtcatcatcggcaaggtgaccgagaacgatattctcatccaggatccgctggagcagcgg
ccgcaggccatcaagcgcgctgacttcgaggcaaattggaacggggccgtcgttctgatg
acccggcgcgcttcgctggctgatctggtgcgccgttttgatatcacctggttcctgcag
gcgatgcacaagtaccggcggctattggctgaggtgcttgtcgcgtcattctttctgcag
ctgttcgcgctggtcacgccgctgttcttccaggtcgtcaccgacaaggtgctgacccat
cgaggattcactacgcttgacgtcctggtcattggcctcattaccgtttcgatcttcgag
acggttctcggtgcgcttcgcacctacgtgttctcccacaccaccaaccggatcgatgtc
gagcttggtgcgcgcctgtttcgccatctgatcgcattgccgatcggatattttgaagcc
cgcagggcgggcgactcggtggcgagggtgcgggagctcgaaaacatccggaacttcctc
accagttcggcgctcaccttggtgatcgatcttgccttcaccttcgtgttcctcgcggtg
atgttctactattcgccgctgttggcctggatcgtggtcggctcgtttccgttctacatc
gcgctgtcggccggcgttaccccgatattccggcaacggctggagcggaaattcgaccgc
ggcgccgaaaaccaggcgttcctggtcgagagcgtgagcggtatccagaccctgaaggcg
atggcgatcgagccgcagatgcagcggcgttgggaagagcagcttgccggctatgtcggt
tcgagcttcgacgtcctgtcacttggcaactggaccagccaagccgtccagttcatcagc
aagatcgtcacggcattgacgctctatttcggggcccatctggtcatcgaaggtcaactg
acggtcggcgaattgattgccttcaacatgcttgccgggcgggtcgcccaaccggtgctg
cggttggcacaactgtggcaggacttccatcaagcgcgagtctcgatcgcgcgactcggt
gacatcctcaatacgacgccggagccgaccttcgatgcgtcccgcgccgcacttccgccg
atccagggcaatgtcacgttcgaacacatcgacttccgctatcgtcttgacgcacctctt
gccctgcacgacgtctcgctcaaggtcgcggccggccaggtgattggtatcgtagggccc
tccggttcgggcaagtcgaccctcacgaagctgttgcagcggctttatgtgccggaagcc
ggccgtgtcttgatcgacggcatcgacctgacggtcgccgacgtcgcctggctgcgccga
caagtcggttccgtcttgcaggagaacgtgctgttcaaccgctcgatccgcgacaacatc
gcactggccgatcccggcatgccgatggagcggatcatcgccgcggccgagctggcaggc
gcccacgagttcattctcgggctgcccgatggatacaacacggtggtcggcgagcgcggt
gcgagcctgtccggcggtcagcgccagcggatcgcgattgcacgggcgcttgtgaccaat
ccaagaatcctgattttcgacgaagcgaccagcgcgctcgactatgagagtgaaagcatc
atccagcgcaacatgcggcggatttccgcgggacgcactgtcttcatcatcgcgcatcgg
ctatcggcggtgcggcacgccgaccggatcatcaccatcgaaggtgggcggctggtggag
gatggcacccacgatgagttgatcaagcaggccggccgctacgcaacacttcaccagatc
caggctgggcttcatgtcgtcgcctga
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