Bradyrhizobium sp. SK17: CWS35_29710
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Entry
CWS35_29710 CDS
T05325
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk00330
Arginine and proline metabolism
brk00480
Glutathione metabolism
brk01100
Metabolic pathways
brk01110
Biosynthesis of secondary metabolites
brk04148
Efferocytosis
Module
brk_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
CWS35_29710
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CWS35_29710
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CWS35_29710
Enzymes [BR:
brk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
CWS35_29710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AUC97954
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All DBs
Position
6422910..6425267
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AA seq
785 aa
AA seq
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MDYFKRFNFLFAAPVFEADDLEGIRFNQIVAEIERSGFEVVRARKLEDAEIAVQTDAAIG
CMVVDWGKKGLEGKTAALINLMRRRGLDFPILLLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPSFIAKNLISRLKQYAENLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYSRSPIGRVFV
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALRAQKEAARIFGAEKTYFVLNGTSTSNKVAL
GSLVTDGDLVLFDRNNHKAAHHGALLIGGGIPVYVPTVRNAWGLIGPMRWDLLDEGALRD
AIRKHPLVKDENAWKKERPFRVAVVEQCTYDGTIHSAEMILKRIGHLCDYILFDEAWAGF
MKFHPIYAGRFAMGLANLGPEAPGIIATQSTHKQLASFSQASQIHIRDRHIKGQKRRVEH
RRFNESFMQHASTSPFYPIFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAVKREF
EEKEARAERRWFFEPFVPDRVMIPDVARENGVHNVAWETISTDQLATTPSYWQLSPGETW
HGFPELTAGFAMTDPNKLTLLTPGFDHSTGAYADHGIPAPVVAQYLRENQIVAEKNDLNS
LLFLLTPGVEASKAGTLVSGLVAFKKLHDDNALIEDVIPEFFRRRPQRYTGVRLRDLCGD
MHRFFRDAGVSKLQASQFLPEHLPEMAMSPRQAAQYLIRNDVDYLPIDQIFGRVAATPFV
VYPPGIATIVPGERLTERSKPMIDYLRTFEASFNAFPGFEVEVQGIYKEIDESGRIRFYT
YVVSE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggactatttcaaacgcttcaacttcctgttcgcggcgccggttttcgaggccgacgac
ctcgaaggcatccgattcaaccagatcgtcgccgaaatcgagcgttccggcttcgaggtg
gtccgcgcccgcaagctggaagacgccgagatcgcggtccagaccgatgccgcgatcggc
tgcatggtggtcgactggggcaagaagggcctcgagggcaagaccgccgcgctgatcaac
ctgatgcgccgccgcggcctcgacttcccgatcctgctgctgatccgccgcaagcgcttc
gaggacctgcccgtcgaggtgctggatttcatcgacggctatgtattcctgtccgaggag
accccctccttcatcgccaagaacctgatctcccggctgaagcaatatgccgagaacctg
aagacgccgttcttcggcgccctggtcgactatgccgaggaaggcaaccagctctggacc
tgcccgggccacaatggcggcgtgttctacagccgcagcccgatcggccgggtgttcgtc
gagcatctcggcgaagccgtgttccgcgacgacctcgacaattccgtgctcgacctcggc
gacctcctcacccatgaggggccggcgctgcgcgcgcagaaggaagcggcgcggatcttc
ggcgccgagaagacctatttcgtgctcaacggcacctcgacctccaacaaggtcgcgctc
ggctcgctggtcaccgacggcgacctcgtgctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgctgatcggcggcggcatcccggtctatgtgccgaccgtgcgcaac
gcctggggcctgatcggcccgatgcgctgggacctgctcgacgagggcgcgctgcgcgac
gccatccgcaagcatccgctggtcaaggacgagaacgcctggaagaaggagcggccgttc
cgcgtcgcggtggtggagcagtgcacctatgacggcaccatccactcggccgagatgatc
ctgaaacggatcggtcatctctgcgactacatcctgttcgacgaagcctgggccggcttc
atgaaattccacccgatctacgccggccgtttcgcgatgggcctcgccaatctcggcccc
gaggcgcccggcatcatcgccacccaatcgacccacaagcagctcgcgagcttctcgcag
gcctcgcagatccacatccgcgaccgccacatcaagggccagaagcgccgggtcgagcat
cgccgcttcaacgaaagcttcatgcagcacgcctcgacctcgccgttctacccgatcttc
gcctcgctcgacgtcggcgcgcagatgatgaagggccgctccggcgaagtgctgtgggac
gacacgatccggctcggcatcgagctgcgcaagaagatccgcgcggtgaagcgcgagttc
gaggagaaggaggcgcgagccgagcggcgctggttcttcgagccgttcgtgcccgaccgc
gtcatgatccccgacgtcgcgcgcgagaacggcgtgcacaacgtcgcctgggagacgatc
tcgaccgaccagctcgcgaccacgccgtcctattggcagctcagcccgggcgagacctgg
cacggcttccccgagctgaccgcgggcttcgccatgacagacccgaacaagctgaccttg
ctgacgccgggcttcgatcactcaaccggcgcctatgccgatcacggcatccccgccccg
gtcgtggcgcaatatctgcgcgagaaccagatcgtcgccgagaagaacgacctcaactcc
ctgctgttcctgctgacgcccggcgtcgaggccagcaaggccggcacactggtgtccggc
ctcgttgccttcaagaagctgcacgacgacaacgcgctgatcgaggacgtcatcccggaa
ttcttccgccgccgtccgcaacgctacaccggggtgcggctgcgcgacctctgcggcgac
atgcaccgcttcttccgcgacgccggcgtcagcaaattgcaggccagccagttcctgccc
gaacatctgccggagatggcgatgtcgccgcgccaggccgcgcaatacctgatccgcaac
gacgtcgactatctgccgatcgaccagatcttcggacgcgtcgcggcgacgccgttcgtg
gtctacccgcccggcatcgcgaccatcgttcccggcgaacggctgacggaacgaagcaag
ccgatgatcgattatctccggaccttcgaggcgagcttcaacgctttcccgggcttcgag
gtcgaggttcagggcatctacaaggagatcgacgaatccggccgtatccgcttctacacc
tatgtcgtgtccgaatag
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