Bradyrhizobium sp. SK17: CWS35_31540
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Entry
CWS35_31540 CDS
T05325
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk00541
Biosynthesis of various nucleotide sugars
brk01100
Metabolic pathways
brk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CWS35_31540 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
brk01005
]
CWS35_31540 (rfaD)
Enzymes [BR:
brk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CWS35_31540 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
brk01005
]
Core region
CWS35_31540 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AUC98279
LinkDB
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Position
complement(6791559..6792539)
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AA seq
326 aa
AA seq
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MFLVTGGAGFIGSNVVAALNDAGRSDVAVCDVLGHDGKWRNLAKRQLADLVPPAELGDWI
KGRRLDAVIHLGAISETTATDGDLVIETNFRLSMRLLDWCTANGTPFIYASSAATYGDGE
QGFADDGSVEALKQLRPMNLYGWSKNLFDLAVAERVAKGERLPPQWAGLKFFNVFGPNEY
HKGPMMSVLARRFDDIKSGRVVQLFKSHREGIADGDQRRDFIYVDDVVRVIIWLIATPQV
SGLFNVGTGKARSFKDLIVSAYGALGREPNIEYVDMPEQIRGSYQYFTQSVVDRLGRAGY
NGGFTRLEDAVGAYVKGFLDRSDRYR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggtaaccgggggtgccggttttatcggatcgaacgtcgtggctgcgttgaac
gacgccggccgcagcgatgttgcggtctgcgacgtgcttggtcatgacggcaaatggcgg
aacctggccaagcgtcagcttgccgatctggttcccccggccgagctcggcgactggatc
aaggggcggcggctcgacgccgtcatccatctcggcgccatctcggagaccacggcaacc
gacggcgatctggtgatcgagaccaatttccgtctctcgatgcggctgctcgactggtgc
accgcgaacgggacgccgttcatctatgcctcctcggccgcgacctatggtgacggcgag
cagggctttgccgacgatggctcggtcgaggcgttgaagcagttgcggccgatgaacctg
tacggctggagcaagaacctgttcgacctcgcggtcgccgagcgggtggcgaagggcgaa
cggctgccgccgcaatgggcgggactgaaattcttcaacgtgttcggcccgaatgaatat
cacaagggcccgatgatgagcgtgctggcgcgccgtttcgacgacatcaaatcgggccgc
gtggtgcagctgttcaagtcgcatcgcgagggcatcgccgatggcgatcagcgccgcgac
ttcatctatgtcgatgacgtcgtgcgggtgatcatctggctgatcgcaaccccgcaggtc
tccgggctgttcaatgtcggcaccggcaaggcacgcagcttcaaggacctgatcgtctcg
gcctatggcgcgctcggccgcgagccgaacatcgaatatgtcgacatgcccgagcagatt
cgcggcagctaccagtatttcacccagagcgtcgtcgatcgtctcggccgcgccgggtac
aatggcggcttcacccgcctggaagacgcagtcggggcctacgtgaagggttttctcgat
cgctccgatcgctatcgttga
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