Bradyrhizobium sp. SK17: CWS35_38415
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Entry
CWS35_38415 CDS
T05325
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
brk
Bradyrhizobium sp. SK17
Pathway
brk00362
Benzoate degradation
brk00624
Polycyclic aromatic hydrocarbon degradation
brk01100
Metabolic pathways
brk01120
Microbial metabolism in diverse environments
brk01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CWS35_38415 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
CWS35_38415 (pcaH)
Enzymes [BR:
brk01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
CWS35_38415 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AUD00268
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All DBs
Position
unnamed:223815..224543
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AA seq
242 aa
AA seq
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MKKHDSFGEFIPRDLNVHPATYTPKYRFSELRSPRRSLIPLASTLSEITGPTFDQVAFER
ADNDLILNGAQDGLPLGERIIIHGYVLDQWGRAVPGALIEIWQANASGRYRHKKDQYLAP
LDPNFGGNGRTLTDAEGHYRFRTIRPGAYPVGLDWRPAHIHFSISGSGWAQRLITQMYFE
GDPLIRSCPIVGTIPTSAQIDRLIAVQDEARFVTMDSRAYRFDIVLRGRRATWFENARGD
DT
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacgatagcttcggcgagtttattccgcgcgatctcaatgttcatcctgca
acctacacgccgaagtatcgtttctctgagttgcgctcaccccggagatctctgattccc
ctggcgagcaccctttcggaaataacgggtccaaccttcgaccaggtcgctttcgagcgc
gccgacaatgatctgatcctcaatggagcccaggacgggcttccgcttggggagcggata
atcattcatggttatgtgctggatcaatgggggcgagccgtgccgggcgcccttattgag
atttggcaggccaatgcgagcggtcgctaccggcacaaaaaggatcagtatctcgcgccg
ctcgatcccaacttcgggggtaacggtcgcacccttaccgatgccgaaggtcactatcgc
ttccgcacgatccgtccgggagcctatccggtcggcctggactggcgtcccgcacatatc
cacttctcgatctccggatcgggatgggcccaacgtctgatcactcaaatgtatttcgag
ggcgaccctctgatccgatcgtgtcccatcgtgggaacgattccgacctcggcgcagatc
gaccgtctcatcgccgtacaggacgaggcgcgatttgtgacgatggatagccgtgcctat
cgattcgatatcgtgctcagagggcgacgggcgacctggttcgaaaatgcacgaggagat
gacacgtga
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