Brevundimonas sp. LM2: BZG35_00285
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Entry
BZG35_00285 CDS
T04750
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brl
Brevundimonas sp. LM2
Pathway
brl03030
DNA replication
brl03410
Base excision repair
brl03420
Nucleotide excision repair
brl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BZG35_00285
03410 Base excision repair
BZG35_00285
03420 Nucleotide excision repair
BZG35_00285
03440 Homologous recombination
BZG35_00285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brl03032
]
BZG35_00285
03400 DNA repair and recombination proteins [BR:
brl03400
]
BZG35_00285
Enzymes [BR:
brl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BZG35_00285
DNA replication proteins [BR:
brl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BZG35_00285
DNA repair and recombination proteins [BR:
brl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BZG35_00285
NER (nucleotide excision repair)
GGR (global genome repair) factors
BZG35_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Taq-exonuc
HHH
Motif
Other DBs
NCBI-ProteinID:
AQR63258
LinkDB
All DBs
Position
complement(61946..64876)
Genome browser
AA seq
976 aa
AA seq
DB search
MSDAADLDAPAAQPGERPLTQDGPAVRLWLIDASAYIFRAYHALPPLTRKSDGLPVGAVQ
GYCNMLWKLLKDMRGADGPTHLAAIFDHSEKTFRNDLYDQYKANRSAPPEDLIPQFPLVR
EATRAFGVHCVELPGYEADDLIATYACKVRDAGGECVIVSSDKDLMQLIGPSVVMWDPMK
DRRLAEEAVFEKFGVTPDKMIDLQALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLE
RAGEIKQPKRRETLINFRDQILLSRQLVRLTCDAPAPEPIDDFAMRDPDPQTLADFLEAM
EFRSLLRRVGDGRLEGHDGSAFAPVRPAPLSAPVISPRYAPQAVPADVEKQAVDHDAYAC
IQTLEQLDAFIERARKAGVVGFDTETDALSATHAGLCGVSLAIGPNDACYVPLTHEHPPV
EGSGGLDFGGEGGETRTPLDQLDKPTVLLRLKTLLEDPGVLKVMQNGKYDMAVMARRGIR
VAPIDDTMLISYVLEGGLHGHGMDELSRLHLGHEPIPFKKVAGTGKAQKSFKHVELKPAT
AYAAEDADVTLRLWSILKPRLAEQQLVAVYETLERGMPAVLADMERAGIRVDPARLRRLS
SEFGLKMAELEAQAHALAGRPFTISSPKQIGELLFGELNLSGGKKTASGQWETGAATLET
LALTHDLPRAILEWRQLAKLKGTYTDALVAAMDPETDRIHTSYQLAAATTGRLASSDPNL
QNIPIRTETGRQIRQAFIAAPGHVLISADYSQIELRLLAHIGDIPELKRAFKAGIDIHTA
TASEMFGVPVADMDPETRRRAKAINFGIVYGISAFGLANQLGIDQGEAGAYIKTYFERFP
GIRTYMDATRAEVRAAGFVSTVFGRKIHIPAIHSKSGAERQFGERAAINAPIQGAAADII
RRAMIRMPGALEAAGLETRMLLQVHDELVFEAPEAEVEVAIPLIKRIMEGAAEPAVALSV
PLVVDARAAGNWDEAH
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgccgccgacctcgatgcccccgccgcccagcccggggagcgccccctgacc
caggacgggcccgcggtgcgcctgtggctgatcgacgcctccgcatacatcttccgcgcc
taccacgccctgccgcccctcacccgcaagtccgacggtctgcctgtgggcgcggtccag
gggtactgcaatatgctttggaagctgctgaaggacatgcggggggcggacgggccgacg
catctggcggcgatctttgatcattcggagaagacgttccggaacgatctgtacgatcag
tacaaggccaaccggtcggcgccgccggaggatctgatcccgcagtttccgctggtccgg
gaggcgacgcgggcgttcggcgtgcattgcgtcgagctgcccggctatgaggccgacgac
ctgatcgccacctatgcctgcaaggtcagggacgcgggcggagagtgcgtgatcgtcagc
tccgacaaggacctgatgcagctgatcggcccgtcggtggtcatgtgggacccgatgaag
gaccgccgcctggccgaggaggcggtgttcgagaagttcggcgtcacccccgacaagatg
atcgacctgcaggccctgatcggcgacagcgtcgacaacgtccccggcgcccccggcatc
ggccccaagaccgcggcccagctgctggacgaatacggcgacctggacaccctgctggag
cgcgccggggagatcaaacagcccaagcgccgcgagaccctgatcaatttccgcgaccag
atcctgctgagccgccagctggtccgcctgacctgcgacgcccccgcgcccgagcccatc
gacgacttcgcgatgcgcgaccccgacccccagaccctggccgacttcctggaggcgatg
gagttccgctccctgctgcgccgcgtcggcgacggcaggctggagggccacgacggctcc
gccttcgcccccgtccgccccgcccccctcagcgcccccgtcatctccccccgctacgcc
ccccaggcggtcccggccgacgtcgaaaaacaggccgtcgaccacgacgcctatgcctgt
atccagaccctggaacagctggacgcctttatcgaaagggcccggaaggcgggggtggtc
gggttcgacaccgagaccgacgccctgtcggcgacccatgccgggctgtgcggcgtctcc
ctggccatcggccccaacgacgcctgctatgtgccgctgacgcatgagcatccgccggtc
gagggatcgggcgggctggatttcggcggcgagggcggcgagacccgcaccccgctggac
cagctggacaagcccacggtgctcctccggctgaagaccctgctggaggaccccggcgtc
ctcaaggtcatgcagaacggcaaatacgacatggccgtcatggcgcgtcggggcatccgc
gtcgccccgatcgacgacaccatgctgatctcctacgtgctcgaagggggcctgcacggc
cacggcatggacgagctgagccgcctgcacctgggccacgagccgatcccgttcaagaag
gtcgccggcaccggcaaggcgcagaaatccttcaaacacgtcgagctgaaaccggccacc
gcctatgccgccgaggacgccgacgtcaccctgcggctgtggtccatcctcaagccccgt
ctggccgagcagcagctggtcgccgtctatgagacgctggagcgcggcatgcccgcggtc
ctggccgacatggagcgggccggcatccgcgtcgaccccgcccgcctgcgccgcctgtcg
tccgagttcgggctgaagatggccgagctggaggcccaggcccacgccctggccggccgc
cccttcacgatcagcagccccaaacagatcggcgagctgctgttcggcgagctgaacctg
tcgggcggcaagaagaccgccagcggccagtgggagaccggcgccgccacgctggagacc
ctggccctgacccacgacctgccgcgcgcgatcctggaatggcgccagctggccaagctg
aagggcacctataccgatgccctggtcgccgccatggaccccgagaccgaccgcatccac
accagctatcaactggccgccgccaccaccggccgcctggcctccagcgaccccaacctg
cagaacatcccgatccgcacggaaacaggccgccagatccgccaggccttcatcgccgcc
cccggccacgtcctgatcagcgccgactattcccagatcgagctgcgcctgctggcccat
atcggcgacatccccgagctgaagcgcgccttcaaggccgggatcgacatccacacggcc
acggcgtccgagatgttcggcgtccccgtcgccgacatggaccccgagacgcgccgccgc
gccaaggccatcaatttcggcatcgtctacggcatctcggccttcggcctggccaaccag
ctgggcatcgatcagggcgaggccggggcctatatcaagacctatttcgaacgcttcccc
ggcatccgcacctatatggacgccacccgcgccgaggtccgcgccgcgggcttcgtctcg
accgtcttcggccgcaagatccacatcccggccatccactccaaatcgggggccgagcgc
cagttcggcgaacgcgccgccatcaacgccccgatccagggcgccgccgccgacatcatc
cgccgcgccatgatccgcatgccgggcgcgcttgaggccgcggggctggagacgcggatg
ctgctgcaggtgcacgacgaactggtgttcgaggccccggaggcggaggtcgaggtggcc
atccccctgatcaagcggatcatggagggggcggcggagccggccgtggcgctgagtgtg
ccgctggtggtggatgcgcgggcggcggggaactgggatgaggcgcactag
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