KEGG   Brevundimonas sp. LM2: BZG35_03985
Entry
BZG35_03985       CDS       T04750                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
brl  Brevundimonas sp. LM2
Pathway
brl02020  Two-component system
brl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:brl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BZG35_03985
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BZG35_03985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brl03021]
    BZG35_03985
Transcription machinery [BR:brl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BZG35_03985
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Dimerisation
Other DBs
NCBI-ProteinID: AQR63343
LinkDB
Position
803368..804870
AA seq 500 aa
MIGQRLEVRQGQGLVITPQLQQAIKLLQLSNQELDEYVDAELEKNPLLQREEAEGLPNEG
REAPVDATELSFSDAEAPDRSSTVDAREDDVYGDATPGERTSDRLSDEAAEQPGLSDWSA
AGKGGSFNDGDGGERPDRHDPTLWEHLQAQASTAGLSPTDHAIALSLIDGVDDGGYFRGE
LLEIAERLGCDLKRVERILTVCQGFEPTGVMARSVPECLKLQLIERNRFDPAMAILLDNL
ELLARRNLVALRTACGVDGEDLAEMIGELKALTPRPGAGFAGEVAQTVIPDVHVRADPAG
GWRVELNTDTLPRLLVDKRYHATVSAAARSETEKAFVADCAAQANWLVKSLDQRAKTILK
VGSEIVRQQDAFLAFGVEFLRPLNLKTVADAIGMHESTVSRVTSNKYVSTPRGVFELKFF
FTAAIQATDGGASHSAEAVRHRIKSMIDHEGSGGDVLSDDRIVEILKEAGIDIARRTVAK
YREALRIPSSIERRRMLKTG
NT seq 1503 nt   +upstreamnt  +downstreamnt
gtgatcggtcagaggctggaggttcgtcagggccaggggctggtcatcacgccccagctg
cagcaggccatcaagctgctgcagctgtccaaccaggagctggacgaatacgtcgacgcc
gaactggaaaaaaaccccctgctccagcgcgaggaggcggaaggcctgccgaacgagggc
cgcgaggcccccgtcgacgccaccgagctcagcttctccgatgccgaggcccccgaccgg
tcctccaccgtcgatgcgcgcgaggacgacgtctatggcgacgccacgcccggcgagcgc
acctcggaccggctgtcggacgaggcggcggaacagccgggcctgtcggactggtcggcg
gccggcaagggcggctccttcaacgacggcgacgggggggaacgccccgaccgccatgat
cccacgctgtgggagcatctgcaggcccaggcctccacggccggcctgtcccccaccgac
cacgccatcgccctgtcgctgatcgacggggtcgacgacggcggctatttccgcggcgaa
ctgctcgaaatcgccgagcggctgggctgcgacctcaagcgggtggagcggatcttgacc
gtctgccaggggttcgagccgacgggcgtcatggcccgctcggtccccgaatgcctgaag
ctgcagctgatcgaacggaaccggttcgacccggccatggcgatcctgctcgacaacctc
gagctcctggcgcgccgcaacctggtcgccctgcgcaccgcctgcggcgtggacggcgag
gatctggccgagatgatcggcgagctgaaggccctgacgccccgacccggtgccgggttc
gccggcgaggtggcccagacggtcatccccgacgtccatgtgcgcgccgatcccgccggc
ggctggcgggtcgagctgaacaccgacaccctgccgcgcctgctggtcgacaaacgctat
catgccaccgtctcggccgccgcccgcagcgagacggagaaggccttcgtcgccgactgc
gccgcccaggccaactggctggtcaagtcgctggaccagcgggccaagaccatcctgaag
gtcgggtccgagatcgtgcgccagcaggacgccttcctggccttcggggtcgagttcctg
cgtcccctgaacctgaagaccgtcgccgacgccatcggcatgcatgagtcgacggtcagc
cgcgtcacctcgaacaaatacgtctcgaccccgcgcggggtgttcgaactgaaattcttc
ttcaccgccgcgatccaggccaccgacggcggggccagccattcggcggaagcggtccgc
catcggatcaagtccatgatcgaccacgaggggtccgggggggatgtcctgtccgacgac
cgcattgtcgagatcctgaaggaggcgggcatcgacatcgcccgccgtacggtcgccaag
tatcgggaagcgctgcgtattccgtcgtcgatcgagcgccggcggatgctgaagaccggc
tga

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