Brevundimonas sp. LM2: BZG35_10030
Help
Entry
BZG35_10030 CDS
T04750
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
brl
Brevundimonas sp. LM2
Pathway
brl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BZG35_10030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brl03019
]
BZG35_10030
Messenger RNA biogenesis [BR:
brl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BZG35_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
AQR61949
UniProt:
A0A1S6EV23
LinkDB
All DBs
Position
complement(2036556..2038235)
Genome browser
AA seq
559 aa
AA seq
DB search
MTNIKANDELVFLPLGGSGEVGMNLNCYGYGPEDDRQWMIVDVGVTFGDQSTPGVDIIVP
DPSFLEGENIRGIVLTHAHEDHIGALGWLWSRIKAPLYATPFTAFLIREKLRDAGILKDV
KIIEVPLGGHVDLGPFQVDFITMTHSIAEPNGLKIATPLGTVFHTGDWKLDPNPVIGKPT
DIAAIETMGDEGLLAMVCDSTNVFVEGEAGSELEAQEGLIALIGSLKKGKIAVGCFASNV
ARMVSVIKAADKAGRRVALAGRSMHRITAAAKHVGLFNESRAILSEDEARHWPADEILYL
CTGSQGEDRAALSRIADGSHPFIKLGAGDHCLFSSRVIPGNELAIADLQDRLADRGVRLY
TEKDHPGIHVSGHPCRDEIRKMYGWARPRVAIPTHGMRRHLMEHAALARELGTPETLTPR
NGDLVRLAPGAAAIIDEVPNGRLYVDGGMVVTEKGEALRERRHASTNGVLVVSFAMDKRG
KIVSDIDVRGIGLPGDEVTSLGDSLDDLAERVEQAVNSLKGEARDDDMVVEAAVGRVLKK
ASQQIWDRRPIVETVILRL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacatcaaagccaacgacgaactcgtcttcctgccgctcggtggctcgggcgag
gtcggtatgaacctcaactgctacggctacggccccgaagacgatcgtcagtggatgatc
gtcgacgtcggcgtgaccttcggcgaccagtcgacgcccggcgtcgacatcatcgtgccg
gatccgtccttcctggagggcgaaaatatccgcggcatcgtgctgacccatgcgcacgag
gaccatatcggggcgctgggctggctgtggagccggatcaaggccccgctgtacgcgacc
cccttcaccgccttcctgatccgcgagaagctgcgcgacgcgggcattctgaaggacgtc
aagatcatcgaggtgccgctgggcggccatgtcgatctggggccgttccaggtcgacttc
atcaccatgacccattcgatcgccgagccgaacgggctgaagatcgccacgcccctgggc
acggtgttccacaccggcgactggaagctggatcccaaccccgtcatcggcaagccgacc
gacatcgccgccatcgagacgatgggcgacgagggcctgctggccatggtctgcgattcg
accaacgtcttcgtcgagggcgaggcgggctcggagctggaggcccaggaaggcctgatc
gcactgatcggcagcctgaagaagggcaagatcgcggtcggctgtttcgcctccaacgtc
gcccgcatggtcagcgtcatcaaggcggcggacaaggccggacgccgcgtcgccctggcc
gggcgttcgatgcaccggatcaccgccgccgccaaacacgtcggcctgttcaacgaaagt
cgcgccatcctgtcggaagacgaggcccgtcactggccggcggacgagatcctgtatctg
tgcaccggcagccagggcgaggaccgcgcggccctgtcgcgcatcgccgacggatcgcac
cccttcatcaagctgggcgcgggcgaccactgcctgttctcgtcgcgggtcatcccgggc
aatgaactggccattgccgacctgcaggaccggctcgccgaccggggcgtgcgtctctac
accgagaaggaccacccgggcatccatgtctcgggccacccgtgccgcgacgagatccgc
aagatgtacggctgggcccggccgcgcgtcgccattccgacccatggcatgcgccgccac
ctgatggagcacgccgccctggcccgcgaactcgggacgccggagaccctgaccccccgc
aacggcgacctggtgcgtctggccccgggcgcggccgccatcatcgacgaggtgccgaac
ggccgcctctatgtcgacggcggcatggtggtgaccgagaagggcgaggccctgcgcgag
cgtcgccacgcctcgaccaacggcgtgctggtggtcagcttcgccatggacaagcgcggc
aagatcgtcagcgacatcgacgtgcgcggcatcggcctgccgggcgacgaggtcaccagc
ctgggcgattcgctggacgacctggccgagcgcgtcgaacaggcggtcaacagtctgaag
ggcgaggcccgcgacgacgacatggtggtcgaggccgccgtcgggcgcgtgctgaagaag
gcgtcgcagcagatctgggatcggcgtccgatcgtcgagaccgtgatcctgcggctgtag
DBGET
integrated database retrieval system