Brevundimonas sp. LM2: BZG35_11405
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Entry
BZG35_11405 CDS
T04750
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
brl
Brevundimonas sp. LM2
Brite
KEGG Orthology (KO) [BR:
brl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brl03019
]
BZG35_11405
Enzymes [BR:
brl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BZG35_11405
Messenger RNA biogenesis [BR:
brl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BZG35_11405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_30
AAA_19
AAA_16
Flavi_DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AQR63497
UniProt:
A0A1S6EZP0
LinkDB
All DBs
Position
complement(2294980..2297430)
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AA seq
816 aa
AA seq
DB search
MLPIHAVLDDLKAAMASSPAVVLAAPPGAGKTTVVPLVLLDAPWRGDGRILVLEPRRLAA
RAAAERMAETLGQATGDVVGYRTRLQSRIGPGTRIEVITEGVFTRMILDDPGLDGVAAVL
FDEFHERSLDADLGLALARDSQGVLREDLKLLVMSATLDIAGISRLLAGPDGVGAPVIEA
QGRAFPVETLYLGRNPVERIEDAMARACLTALGEQSGSVLAFLPGQGEIHRTAQRLNERL
RDPAVDVVPLFGAMEKGAQDRAIEPSPPGRRKVVLATSVAETSLTIEGVRVVIDSGLSRV
PRFEPSSGLTRLATVRVSRSSAEQRRGRAGRTQPGVCYRLWDEEATRGLVPHQRPEMLEA
DLTGLALDLARWGARTTEGLALLDAPPKGAMAEARAVLTRLGALDAAGALTPHGQRLTRM
PLTPRLAHLVTVAADGGEAKLGARIAAVLSEPGLGGNAVDLRDRLRGLDQDRSPRASDAR
KLVDRWAKAAVSGAGPNRDGGVDVGTLLAEAFPERVARARGKAGEVLLASGRGAFVDPTD
PLAAEPWLAVGDLGGGETRDRIRLAAPLDPATLEGRMTTEDRLAQEPSGRRVVRRVRRLG
AIVVDERVVGAPDRAMVTAALKADIERDGLSALRWGERATGLRARLAFLHGLEEGWPDVS
DAGLLAARETWLWPLLAHVQSLESIADGPLEAALLTLVAWDRHRDLDALAPPRLVTPLGS
AAIDYAAHGGPRVDIRVQELFGLRAHPTVGGGRVPLTLALLSPARRPVQVTKDLPGFWAG
SWKAVRADMRGRYPRHPWPENPAEAPPTNRVKPRGT
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atcctgccgatccacgccgttctggacgacctgaaggccgcgatggcgtccagccccgcc
gtggtcctggcggccccgccgggcgcgggcaagacgacggtcgtgcccctggtcctgctg
gacgccccgtggcgcggggacgggcggatcctggtgctggaaccgcggcggctggcggcc
cgggcggcggcggagcggatggcggagacgctgggccaggcgaccggcgacgtcgtgggc
tatcgcacccggctgcagagccggatcgggccggggacgcggatcgaggtcatcaccgag
ggcgtcttcacccgcatgatcctggacgatccggggctggacggcgtggcggcggtgctg
ttcgacgagttccacgagcgcagtctggacgccgatctgggcctggccctggcgcgggac
agccagggcgtgctgcgcgaggacctgaagctgctggtcatgtcggcgacgctggacatc
gccggcatctcccgcctgctggcggggcccgacggcgtcggcgcgccggtgatcgaggcc
cagggccgggccttcccggtcgagaccctttatctgggccgcaacccggtcgagcggatc
gaggacgccatggcccgggcctgtctgacggcgttgggcgagcagtcgggctcggtcctc
gcctttctgccggggcagggcgagatccaccgcacggctcagcggctgaacgagcgtttg
cgcgaccccgccgtcgatgtcgtgccgctgttcggggcgatggagaagggggcgcaggac
cgggccatcgagccgtcgccgcccgggcgtcgcaaggtggtgctggcgacctcggtggcc
gagactagcctgaccatcgagggggtgcgggtggtgatcgacagcggcctgtcgcgcgtg
ccccggttcgaaccgtccagcggcctgacgcggctggcgacggtgcgggtcagccgctcc
tcggccgagcagcggcgcggccgggccgggcggacccagcccggggtctgctaccggctg
tgggacgaggaggccacgcggggcctggtcccgcatcagcggccggagatgctggaggcc
gatctgacggggctggcgctggatctggcgcggtggggggcacgcacgaccgaaggtctg
gccctgctggacgcgccgccgaagggggccatggccgaggccagggcggtgctgacgcgg
ctgggggcgctggacgcggccggggcgctgacgccgcatggacagcggctgacgcggatg
ccgctgacgccgcgcctggcgcatctggtgacggtggcggcggatgggggcgaggcgaaa
ctgggcgcgcggatcgcggcggtgctgagcgagcccggcctgggtggaaacgcggtcgac
ctgcgcgaccggctgcggggcctggatcaggaccgcagcccccgcgccagcgacgcgcgc
aagctggttgaccggtgggccaaggcggccgtgagcggggcagggccgaaccgtgacggc
ggggtcgacgtcggcaccctgctggccgaggcctttccggagcgggtggcgcgggcgcgg
ggcaaggcgggggaggtgctgctggcgtccgggcgcggcgcctttgtagacccgaccgat
ccgctggcggccgagccgtggctggcggtcggcgatctgggtggcggcgagacccgcgat
cgcatcagattggcggccccgctggaccccgcgacgctggaagggcggatgacgaccgag
gaccggctggcgcaggagccctcgggtcggcgggtagtgcgccgggttcgtcgtctgggc
gcgatcgtggtggacgagcgggtggtcggggccccggatcgggccatggtcaccgccgcc
ctgaaggctgacatcgagcgggacgggctttcggccctacgctggggcgagcgggcgacc
ggtctgcgtgcccgactggccttcctgcacggtctggaagagggctggccggatgtctcg
gacgccgggctgttggccgcgcgggagacgtggctgtggccgctgctggcccacgtgcag
tcgctggaaagcatcgcagacggtccgctggaggcggccctgctgacgctggtggcctgg
gaccggcatcgcgacctcgacgccctggccccgccgagactggtcacccccctgggttcg
gccgcgatcgactatgcggcgcacggcggtccgagggtcgatatccgggtgcaggaactg
ttcggcctgcgcgcgcatcccacggtaggtggcggccgcgtgcccctgaccctggctttg
ctgtcccccgcgcggcggccggtgcaggtgaccaaggacctgcctggcttctgggccggg
tcgtggaaggcggtgcgggccgatatgcgcgggcgctatccgcgccacccctggcccgag
aacccggccgaggccccgccgaccaaccgggtcaagccacgcggaacctga
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