Brevundimonas sp. LM2: BZG35_12625
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Entry
BZG35_12625 CDS
T04750
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
brl
Brevundimonas sp. LM2
Pathway
brl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BZG35_12625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brl03021
]
BZG35_12625
03400 DNA repair and recombination proteins [BR:
brl03400
]
BZG35_12625
Enzymes [BR:
brl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BZG35_12625
Transcription machinery [BR:
brl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BZG35_12625
DNA repair and recombination proteins [BR:
brl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BZG35_12625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AQR62395
UniProt:
A0A1S6EWB3
LinkDB
All DBs
Position
complement(2531630..2535823)
Genome browser
AA seq
1397 aa
AA seq
DB search
MNQEVLNIFNAVPVTPTFDQIKIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIELASPVAHIWFLKS
LPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYRYQDEFGDDGFTA
EIGAEAVRNLLMGIDLHAEAERHRGELADSPSEVKAKKASKRLKLIEAFLESGNKPEWMI
LTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PDLKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPQVWDILEEVIRE
HPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGEPGEGKLFANVGEIDAALD
AAVVTLHTRIKARWTEEDKDGNEITKVIDTTPGRMKLGALLPKNPNVGYRLLEKNLTKKE
IGNLIDVVYRHCGQKATVIFADQMMGLGFKEAARAGISFGKDDIVIPAKKVEIVAATRTL
VEEYEQQYADGLITKGEKYNKVVDAWAKATDRVADEMMGEIAQPRVLASGRTAEINSVYM
MANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPIVSNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIVTEEDCGSTRGITLRAVVEGGDVLVSLGQRVLGRYN
AEDIKAPGSDTVLFPADTYLVEDVVEVIDREGVQSVKVRSALTCEAEAGICGMCYGRDLA
RGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFYEATNAGTVKVVGPTV
IGAHGDPVSMSRNVVVTVMVDGKDRESYKIPYGGRLRVKEGSEVKKNQRLAEWDPYTTPI
ITEVGGTVRFEDLTEGLSFREETDEATGIAQRVVIDWRASPRGSDLRPAMGITAGDAYTK
LASGSDARYLLPVGAILSVANGDEVKPGEILARIPTEGAKTRDITGGLPRVAELFEARRP
KDCAVIAEMDGRVEFGRDYKNKRRIKITPELNADGEQGEPVEFLIPKGKHISVHDGDLIQ
KGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVE
ILDSGETTLIRGDTVEVAEAVLENEKVEKRGGRIATTQPVLLGITKASLQTRSFISAASF
QETTRVLTDASVNGKKDTLEGLKENVIVGRLIPAGTGAYLRSLQKVANARDAELTSTREA
AIEPLPAELQLELAESE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaacgcggtcccggtcaccccgaccttcgaccag
atcaagatcgccctggcgtcccccgaaaagatccgctcgtggtccttcggcgagatcaag
aagcccgagacgatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcg
cggatctttggcccgaccaaggattacgaatgcctgtgcggcaagtacaagcgcatgaaa
tacaagggcatcatctgcgagaagtgcggcgttgaggtcaccctggcccgcgtgcggcgc
gagcggatgggccatatcgaactggcgtccccggtcgcccacatctggttcctgaagtcc
ctgccgtcgcgcatctcgctgatgctcgacatggcgctgaaggacgtggagcgcgtgctc
tatttcgagaactacatcgtcaccgagccgggcctgaccccgctgaagcagaaccagctg
ctgacggaagacgagttctatcgctaccaggacgagttcggcgatgacggcttcaccgcc
gagatcggcgccgaggccgtgcgcaacctgctgatgggcatcgacctgcacgccgaggcc
gagcgccaccggggcgagctggccgacagcccgtcggaagtgaaggccaagaaggcctcc
aagcgcctgaagctgatcgaggccttcctcgaaagcggcaacaagcccgagtggatgatc
ctgacggtcgtgccggtcattccgccggaactgcgcccgctggtgccgctggacggcggt
cgtttcgcgacctccgacctgaacgacctgtaccgccgcgtgatcaaccgcaacaaccgc
ctgaagcggctgatggagcttcgcgcgcccgacatcatcatccgcaacgagaagcggatg
ctgcaagaatcggtcgacgccctgttcgacaacggccgtcgcggccgcgtcatcacgggg
gccaacaagcgtccgctgaagtcgctggccgacatgctgaagggcaagcagggccgcttc
cgccagaaccttctgggcaagcgcgtcgactattcgggccgttcggtcatcgtggtcggt
cccgacctgaagctgcacgagtgcggcctgcccaagaagatggcgctcgagctgttcaag
ccgttcatctatgcgcgcctggacgccaagggcctgtcgggcacggtcaaacagtccaag
cgcatggtcgagcgcgaacagccccaggtgtgggacatcctcgaagaggtgatccgcgag
cacccagtcatgctgaaccgcgcgccgacgcttcaccgtctgggcatccaggcgttcgag
cccaagctgatcgagggcaaggccatccagctgcacccgctggtctgcgccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgtcccgctgagcctcgaggcccagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtcctgggcctgtactacctgtcgctggtcaaggac
ggtgagcccggcgagggcaagctgttcgccaacgtgggcgagatcgacgcggcgctcgac
gccgccgtcgtgacactgcacacgcggatcaaggcgcgctggaccgaggaagacaaggac
ggcaacgagatcaccaaggtgatcgacaccacgccgggccggatgaagctgggcgcactg
ctgcccaagaacccgaacgtcggctaccgcctgctcgagaagaacctgaccaagaaggaa
atcggcaatctgatcgacgtggtctatcgccactgcggtcagaaggcgacggtgatcttc
gccgaccagatgatgggcctgggcttcaaggaagcggcgcgcgccggcatctccttcggc
aaggatgacatcgtcattccggccaagaaggtcgagatcgtcgccgccacgcggacgctg
gtcgaggaatacgagcagcagtacgccgacggcctgatcaccaagggcgagaagtacaac
aaggtcgtcgacgcctgggccaaggccacggaccgggtcgccgacgagatgatgggcgag
atcgcgcaaccgcgcgtcctggcctcgggtcggaccgccgagatcaactcggtctacatg
atggccaactccggcgcccgcggttcgcaggcccagatgaagcagctcggcgggatgcgc
ggcctgatggccaagccgtccggcgagatcatcgagaccccgatcgtgtcgaacttcaag
gaaggcctgaccgtcctcgaatacttcaactcgacccacggggcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggttacctgacccgtcgtctggtggacgtggcg
caggactcgatcgtcaccgaggaagactgcggttccacgcggggcatcaccctgcgcgcc
gtggtcgagggcggcgacgtcctggtctcgctggggcaacgcgttctgggtcgctacaac
gccgaggacatcaaggccccggggtcggacaccgtcctgttcccggccgacacctatctg
gtggaggacgtggtcgaggtcatcgaccgcgagggcgtccagtcggtcaaggtccgctcg
gccctgacctgcgaggccgaggccggcatctgcggcatgtgctacggccgtgacctggcg
cgcggcaccaacgtcaacatcggcgaagcggtcggcgtcatcgcggcgcaatcgatcggc
gagccgggcacccagctgacgatgcggaccttccacatcggcggcacggcccaggtggcg
gagacctccttctacgaggcgaccaacgccgggaccgtcaaggtcgtcggccccaccgtc
atcggcgcccacggcgatccggtgtcgatgagccgcaacgtcgtcgtcaccgtcatggtc
gatggcaaggatcgcgaaagctacaagatcccctacggcggccgcctgcgcgtcaaggaa
ggctccgaggtcaagaagaaccagcgtctggcggagtgggacccctacaccaccccgatc
atcaccgaggtgggcggcactgtccgcttcgaggatctgaccgagggcctgtcgttccgc
gaggaaaccgacgaggcgacgggcatcgcccagcgcgtcgtcatcgactggcgcgcctcg
ccccgcggttcggatctgcgtccggccatggggatcacggcgggcgacgcctacaccaag
ctggcctcgggctccgacgcccgatacctgctgccggtgggggccatcctgtcggtcgcc
aacggcgacgaggtcaagcccggcgagatcctggcccgtatcccgaccgagggtgccaag
acgcgcgacatcaccggcggtctgccgcgggtggccgagctgttcgaggcccgtcgcccc
aaggactgcgcggtcatcgccgagatggacggtcgcgtcgaattcggtcgcgactacaag
aacaagcgtcgcatcaagatcacgccggaactgaacgccgatggcgaacagggtgaaccc
gtcgagttcctgatccccaagggcaagcatatctccgtccacgacggcgatctgatccag
aagggcgactacatcatcgacggcaaccccgatccgcacgatctgctgcgtattcagggc
gtcgaggcgctggccgagtatctggtgaacgaagtgcaggaggtctatcgactgcagggc
gtgccgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgag
atcctcgactcgggcgaaaccaccctgatccgtggcgacacggtcgaagtggccgaggcc
gtgctggagaacgagaaggtcgagaagcgtgggggccggatcgccaccacccagcccgtc
ctgctcggcatcaccaaggcgtcgctgcagacccgcagcttcatctcggcggcgtccttc
caggagaccacccgcgtcctcacggacgcctcggtcaacggcaagaaggacacgctggaa
ggcctgaaggaaaacgtcatcgtcggccggctcatcccggcgggcacgggggcctacctc
cgcagcctgcagaaggtcgccaacgcccgcgacgccgagctgacctcgacccgcgaagcc
gccatcgagccgcttccggccgagctgcagctggagctggccgagagcgaataa
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integrated database retrieval system
