Brevundimonas sp. LM2: BZG35_15130
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Entry
BZG35_15130 CDS
T04750
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
brl
Brevundimonas sp. LM2
Pathway
brl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BZG35_15130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brl03400
]
BZG35_15130
DNA repair and recombination proteins [BR:
brl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BZG35_15130
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BZG35_15130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
GPW_gp25
DUF2963
Microtub_bd
ACP_syn_III_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AQR62838
LinkDB
All DBs
Position
3036814..3039189
Genome browser
AA seq
791 aa
AA seq
DB search
MNRSSTPKGSAPVIQKPVHIPNKGVAEAPTAFVRDGAPPMPKASKNLPMFAPVTGPRLTP
EEAPTGPGDWVPHRPDRPAKSLKGRARHPFRLETSYTPAGDQPAAIAELVSQAQAGDRDQ
VLLGVTGSGKTFTMAKVIEATQRPALILAPNKTLAAQLYSEFKSFFPDNAVEYFVSYYDY
YQPEAYVPRTDTYIEKDSSINEQIDRMRHSATRSILERDDVIVVASVSCIYGIGSVETYT
AMTFDLKIGDQIDESKLRADLIALQYKRNDVHFDRGMFRKRGDTVEIFPVHQEDRAWRVS
LFGDEIESIAEFDPLTGKKTADLAEITVYAASHYVTPRPTLNQALGGIKAELKETLDWMV
ENGKLLEAQRLEQRVRFDLEMMEATGSCAGIENYSRWLTGRSPGEPPPTFFEYIPDNALL
FVDESHVTVGQINGMFRGDYRRKSTLAEYGFRLPSCIDNRPLKFDEWEAMRPQTVHVSAT
PGPWEMEQTGGVFVEQVIRPTGLIDPPVEIRPVSGQTRNQVDDVIDEVKAVARAGYRSLV
TVLTKKMAEDLTEYMHEQGVRVRYMHSDVDTMERIEIIRDLRLGTFDVLIGINLLREGLD
IPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERAMAETERR
RERQTAYNLEHGITPESVKRDIKEILNSPYEKDRVLIPTTGVKEDARAFIGNNFQATLKD
LEGKMREAASNLEFEEAGRLRDEIKKLKLLDLEFANEIMTGAGEAVDKAAPKKWRAEAAV
EKAEAFRKGRL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttcctcgacccccaagggctcggcccccgtcatccagaagccggtgcacatc
ccgaacaagggcgtggccgaggctccgacggccttcgtccgcgacggtgcgcccccgatg
ccgaaagcgtcgaagaacctccccatgttcgcccccgtcaccgggccgcgcctgacgccg
gaggaggcccccaccggccccggcgactgggtcccgcaccgtcccgaccgtccggccaag
agcctgaagggccgcgcccgccaccccttccgcctggagaccagctacacccccgccggc
gaccagcccgccgccatcgccgaactggtgtcccaggcccaggcgggcgaccgcgaccag
gtgctgctgggcgtcaccggctcgggcaagaccttcaccatggccaaggtcatcgaggcg
acccagcgcccggccctgatcctggcccccaacaagaccctcgccgcccagctctacagc
gagttcaagtctttcttcccggacaacgcggtcgaatatttcgtcagctactacgactac
taccagcccgaagcctacgtcccccgcaccgacacctacatcgagaaggacagctccata
aacgagcagatcgaccggatgcgccactcggcgacgcggtcgatcctggagcgggacgac
gtcatcgtcgtcgcctcggtcagctgcatctacggcatcggctcggtcgagacctatacg
gccatgaccttcgacctgaagatcggcgaccagatcgacgagtccaagctccgcgccgac
ctcatcgccctgcagtacaagcgcaacgacgtccatttcgaccgcggcatgttcaggaag
cgcggcgacaccgtcgagatcttcccggtgcaccaggaggaccgcgcctggcgcgtctcc
ctgttcggcgacgagatcgaatccatcgccgagttcgaccccctgaccggcaagaagacc
gccgacctggccgagatcaccgtctatgccgccagccactacgtcaccccccgcccgacg
ctcaaccaggcgctcggcggcatcaaggccgagctgaaggagacgctcgactggatggtc
gagaacgggaaactgctggaggcccagcggctggaacagcgcgtgcgcttcgacctggag
atgatggaggccaccggctcctgcgccggcatcgagaactattcccgctggctgaccggc
cgcagccccggcgagcccccgcccaccttcttcgaatacatccccgacaacgccctgctg
ttcgtcgacgagagccacgtcaccgtgggccagatcaacggcatgttccggggcgactac
cgccgcaaatccacattggccgaatacggcttccgcctgccttcctgcatcgacaaccgc
ccgctcaagttcgacgaatgggaggccatgcggccccagacggtccacgtcagcgccacc
cccggcccgtgggagatggaacagaccggcggcgtcttcgtcgaacaggtcatccgcccc
accggcctgatcgaccccccggtcgagatccgcccggtcagcggccagacccgcaaccag
gtcgacgacgtcatcgacgaggtcaaggccgtcgcccgcgccggctaccgctccctggtc
accgtcctgaccaagaagatggccgaggacctgaccgaatacatgcacgaacagggcgtc
cgcgtgcgctacatgcactccgacgtcgacaccatggagcggatcgagatcatccgcgac
ctgcgcctgggcaccttcgacgtcctgatcggcatcaacctgttgcgcgaggggctcgac
atccccgagtgcggcctggtcgccatcctcgacgcggacaaggagggcttcctccgctcc
gagacctccctgatccagaccatcggccgcgcggcccgcaacgtcgacggccgcgtcatc
ctctatgccgaccggatcaccggctcgatggagcgcgccatggccgagaccgagcgccgc
cgcgaacgccagaccgcctacaacctcgaacacggcatcacgcccgagagcgtcaagcgc
gacatcaaggagatcctgaacagcccctatgagaaggaccgcgtcctgatccccacgacc
ggcgtgaaggaggacgcccgcgccttcatcggcaacaatttccaggccacgctgaaggac
ctcgaaggcaagatgcgcgaggccgcctccaacctcgagttcgaggaggccggccggctc
cgggacgagatcaagaagctgaaactgctggacctggagttcgccaacgagatcatgacc
ggggcgggcgaggcggtggacaaggcggccccgaagaagtggcgcgccgaggcggcggtg
gagaaggcggaggcgtttcggaaggggcggttgtag
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