Brachyspira murdochii: Bmur_0036
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Entry
Bmur_0036 CDS
T01229
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brm
Brachyspira murdochii
Pathway
brm03030
DNA replication
brm03430
Mismatch repair
brm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bmur_0036
03430 Mismatch repair
Bmur_0036
03440 Homologous recombination
Bmur_0036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brm03032
]
Bmur_0036
03400 DNA repair and recombination proteins [BR:
brm03400
]
Bmur_0036
Enzymes [BR:
brm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bmur_0036
DNA replication proteins [BR:
brm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bmur_0036
DNA repair and recombination proteins [BR:
brm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bmur_0036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ADG70147
UniProt:
D5U3Y0
LinkDB
All DBs
Position
38394..42116
Genome browser
AA seq
1240 aa
AA seq
DB search
MSFVHLHVHTQYSILDGASRIKSLYSKKDKKKRLIPGLIDRAVELEMPAIAITDHGNMFG
VMEFFSEAKDKGIIPVIGCELYVAPKTRFDKKIENSEEKSAMHLILLAKDKEGYDNLCKL
VTFGYTEGFYYRPRVDHELIEKYNKGLICLSACMGGEIPIAIRKKDYKQASKLAEYYKSI
FGNDFYIELQDHNIPEEKSLNSALYKLANHHSIEMVVTNDVHYVLKEDAKAHEILLAIQT
KATLDSPRRYKFPSNEFHLKSKEEMMKSFAKLPKAFENTVKIAEQCRDLNIMTKTYYMPN
YELPNGETETTALRNMCMEGLNKHYNNNIPKEAMERLEMELGVISKMGFEGYFLVVQDFI
NYARNHDVAVGPGRGSAAGSIVAFATGITKVNPLDYNLLFERFLNPERKSMPDIDVDFQD
DKREVIIDYVKEKYGKDNVAQIATFGALGGRSVIRDVCRVMGIDLATADRLAKGIPNDVS
RVVDIYDHPDCAEFRKEVESSRELKNMYEISTRLDGLVRNVGLHAAGVIISSHPIMDLAP
VYQDSKTGTRACQYEMTYVESAGLIKMDFLGIKNLRLIKDAVKDIKERYGTEIDIDKIPL
DDEAVYDIFRKADTGGVFQFESPGMRQMLINIQPTGFDDLVSSVALYRPGPLNSGMDKDY
ADRKNKRKEIVYKHPDLEPILKESQGVLIYQEQIMAISRVIGGFTAAEADDLRKAMGKKI
VEKMNSMEEKFINGGLERGYDKELLTYLFDTMKGFAEYGFNKSHSVCYALIAYQEAYIKA
HYPMEYYVALLNTVIADTDKISLYLNEVKQKNIDIVTASVFESNALFSQKNGKIVYALHA
VKGVGLHAALAIEEEREKNGQFKNLEDFVKRVDVHLVNRKVYETLIKCGAFSEFGHTESA
LLASLDAILAHASNYQKETLSGQTMLFDSMSEDDSGSASLVIEKQVEYASNILMENEKEV
LGFSLRYHPFARYISKIDYKYFNNTLDIDNLKDKDEFSLPCVVMSVTESTTKKNTPMLTL
KVIDLFTEYVFYITAKNQIDKYKDMISEQAGILIKGRREKNRFSDKIYNNISDIKLLDSY
LNDKNLKLKEVKRDNIKRDSVSEVISDSRNDNKAVQINKNDSPFKNTSNKENDIKRSDNV
VSNAAFTSRPNNSIAVKHTNSGKKQLALYVNKNIFDDMDLLCLQNAISSNPGDYTIFLKL
KSESGTEVFKIGENYKVDPNQRFLNEAKSALRSLIEIEYA
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttcacttgcatgtacatacacaatattcaatacttgacggagcttcacgc
ataaaatctctttattctaaaaaagataagaagaagagacttataccgggattaatagac
agagccgtagagcttgaaatgcccgctatagcaattacagatcatggtaatatgttcggt
gttatggagtttttctctgaggctaaagataaaggcattatacccgtaataggctgtgag
ctttatgtagcccctaaaactagatttgataaaaagatagaaaactcagaagaaaaaagt
gctatgcatcttattcttcttgccaaagataaagaaggatatgataatttatgtaagctt
gtaactttcggatatactgaaggtttttattatcgtcctagagtagatcatgaacttata
gaaaaatataataagggattaatttgtttatctgcttgtatgggcggagaaatacctatt
gctataagaaaaaaagattataaacaggcatcaaaactagctgaatattataaatctatt
ttcggaaatgatttttatatagaacttcaggatcataatatccctgaagaaaaatcatta
aacagtgcattatataaattggccaatcatcatagtatagaaatggttgtaactaatgat
gttcattatgtattaaaagaagatgccaaagctcatgagatacttcttgccatacagaca
aaagctactttagattctccaagaagatataagtttccaagtaatgagtttcatttaaaa
agcaaagaagagatgatgaagtcatttgcaaaactccctaaggcatttgaaaatactgtg
aaaatagcagagcaatgcagagacttgaatataatgactaaaacttattatatgcctaat
tatgaacttccaaacggagaaacagaaactacagcacttagaaatatgtgtatggaaggg
cttaataaacattataacaataatattcccaaagaggctatggaaaggcttgaaatggaa
ttgggtgttataagtaaaatgggttttgaaggatattttcttgtagttcaggatttcatc
aactatgcaagaaatcatgatgttgctgtgggacctggcaggggaagtgcagccggatca
atagtggcatttgctactggaattactaaggttaatcctcttgattataatttgcttttt
gaaagatttttaaatccggaaagaaaaagcatgccggatatagacgttgacttccaagat
gataaaagagaagtaataatagattatgtaaaagaaaaatacggtaaagataatgttgct
cagattgctacattcggtgctttgggaggacgttctgttataagagatgtttgccgtgtt
atgggtatagacttagctactgccgacagacttgctaagggtatacctaatgatgtaagc
agagtagttgatatatatgatcacccagattgtgccgagtttagaaaggaagtagaaagc
agcagagaattaaaaaatatgtatgagatatctacaagacttgacggtttggttaggaat
gtaggcttacatgcagctggagttattatatcttcgcaccctataatggatttagctccg
gtttatcaggattctaaaacaggcactagggcttgtcagtatgagatgacttatgttgaa
agtgctgggcttataaagatggactttttaggtatcaaaaacttaagacttataaaagat
gctgtaaaagatataaaagaaagatatggtactgaaatagatattgataaaattccttta
gatgatgaagctgtttatgatatatttagaaaagctgatactggaggagtatttcagttt
gaaagtcccggtatgcgtcagatgcttattaatatacagcccacaggttttgatgatttg
gtttcaagcgttgcattataccgccctggtcctttaaactctggtatggataaagattat
gccgatagaaaaaataaaagaaaagaaatagtatataagcacccagatttagagcctata
cttaaagaaagtcagggagtattaatatatcaagagcagattatggcaataagccgggtt
ataggagggtttactgctgctgaagctgatgatttgagaaaggctatgggtaaaaaaatc
gtagagaaaatgaactctatggaagagaaattcattaacggcggtcttgaaagaggttat
gataaagagttattaacttatttatttgatacaatgaaaggttttgctgaatatggtttc
aataaatcgcactctgtctgctatgccttaattgcctatcaggaagcatatattaaagca
cattatcctatggaatattatgtggcacttcttaatactgttatagcagatactgataaa
atatctttatatcttaatgaagttaaacaaaaaaatatagatatagttacagcaagcgtt
tttgaaagcaatgcattattctctcagaaaaacggaaagatagtttatgccttgcatgct
gttaaaggtgtaggtcttcatgctgctttggcgattgaagaagagagagagaaaaacgga
cagttcaaaaacttagaagattttgttaaacgtgttgatgttcatttggttaatagaaaa
gtttatgaaacattaattaaatgcggtgctttctcagagttcggacatactgaaagtgct
ttgcttgcatctcttgatgcgatacttgctcatgcttctaattatcaaaaagaaacttta
tctggtcagactatgctttttgactctatgtctgaagatgacagcggaagtgcttctttg
gttatagaaaaacaagtggaatatgcttctaatattttaatggaaaatgaaaaggaagtt
ttaggcttttctttaagatatcatccttttgctagatatattagtaaaattgattataaa
tattttaataatactttggatattgataatttaaaagataaagatgagttttctcttcct
tgcgtagttatgtctgtaacagaatcaactacaaagaaaaatactcctatgctaacatta
aaagtaatagatttatttactgagtatgtattttatattacagcaaaaaatcagatagat
aaatataaagatatgatctctgaacaggctggaatattaataaaaggacgcagagaaaaa
aatagattctctgataaaatatacaataatatttcagacataaaattattggatagttat
ttaaatgataaaaatctcaaacttaaagaagttaaaagggataatataaaaagagacagt
gtatctgaagtaatttctgatagtagaaatgataacaaagcagttcagataaataaaaat
gattcaccatttaaaaatacttctaataaagagaatgatattaaacgctctgataatgtt
gtttctaatgcagcatttacaagcagacctaataacagtatagcagttaagcatactaac
agcggtaaaaagcaattggctctttatgttaataaaaatatatttgatgatatggatttg
ttatgtcttcaaaatgctatatcttcaaatccgggggattatactatattcttaaagtta
aaatctgaaagcggtactgaagtattcaagataggcgaaaattacaaagtcgatcctaat
cagagatttttaaatgaagctaaaagtgcattaagatcattaatagaaattgaatatgct
taa
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