Brachyspira murdochii: Bmur_1222
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Entry
Bmur_1222 CDS
T01229
Name
(GenBank) DNA glycosylase/AP lyase, H2TH DNA-binding protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
brm
Brachyspira murdochii
Pathway
brm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bmur_1222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brm03400
]
Bmur_1222
Enzymes [BR:
brm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bmur_1222
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bmur_1222
DNA repair and recombination proteins [BR:
brm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bmur_1222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ADG71316
UniProt:
D5U9E3
LinkDB
All DBs
Position
complement(1417559..1418212)
Genome browser
AA seq
217 aa
AA seq
DB search
MKELPNLITLINSIKGEICYSYINKIVAIDKQYKEMEDVEGQKIIDVLRYGGYMHFQFSQ
DAMLVDLGPNGSFVLTEDDTYDNSIIKLETDHGNFFVVDDGKNKEEMTKIIPIWKDSTTM
PQIGYDPLTKQFNYNLFCQLLADNDTTVEKLIKNPLILSGIGNVYGDMILKKASITKKTK
TSEITKVKAREIFDAIKQVLREASGNTEEEDSDISEE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactaccaaatttaattacattaataaactctattaaaggggagatttgctat
tcttatatcaataaaatagtagctatagataaacaatataaagaaatggaagatgtagag
ggtcagaagattatagatgtactaagatacggaggatatatgcattttcagttttctcag
gatgctatgcttgtagatttaggtcctaatggttcttttgtacttacagaagatgataca
tatgataatagtattattaaattagaaacagatcatggaaatttttttgttgtagatgat
ggtaaaaataaagaagaaatgactaaaataattcctatatggaaagattctactacaatg
cctcaaataggttatgatcctcttactaagcagtttaattataatttattctgtcaatta
cttgcagataatgataccactgtagagaagttaataaaaaatcctctaatattaagcggc
ataggcaatgtatatggggatatgatactaaaaaaggcatcaataactaaaaaaactaaa
acttcagaaataactaaggtcaaagctagagagatatttgatgctataaagcaggtttta
agagaggcatctggaaatacagaagaagaggatagtgatatttcagaagaataa
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