KEGG   Breoghania sp. L-A4: D1F64_01155
Entry
D1F64_01155       CDS       T05594                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
brn  Breoghania sp. L-A4
Pathway
brn03030  DNA replication
brn03410  Base excision repair
brn03420  Nucleotide excision repair
brn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:brn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1F64_01155
   03410 Base excision repair
    D1F64_01155
   03420 Nucleotide excision repair
    D1F64_01155
   03440 Homologous recombination
    D1F64_01155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brn03032]
    D1F64_01155
   03400 DNA repair and recombination proteins [BR:brn03400]
    D1F64_01155
Enzymes [BR:brn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1F64_01155
DNA replication proteins [BR:brn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     D1F64_01155
DNA repair and recombination proteins [BR:brn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     D1F64_01155
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D1F64_01155
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH_2 Taq-exonuc NYN_YacP
Other DBs
NCBI-ProteinID: AXS38925
UniProt: A0A346QXG6
LinkDB
Position
complement(235759..238680)
AA seq 973 aa
MSSESKISRPLAPGDHVFLVDGSSYIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWKLLR
EADETAAGVTPTHIAVIFDHSAKTFRNEIYDQYKAQRPDVPEDLRPQFSIIRDAVRAFNV
ASIEQEGFEADDLIATYTRQAVEAGADVTIISSDKDLMQLIQPGVAMVDTMKNKRIEAPE
VQEKFGVAPDKVVDVQALAGDSVDNVPGVPGIGVKTAAQLINEYGDLENLLAHASEIKQT
KRRENLIEFAEQARISRRLVELDQNMPVDVALADSAVQPLDGEKAVAFLKAMEFTTLTRR
VAELSETSAEDIEATEVAIKGWESPTPVASSATSGDSGEATPSALAERRAANIGALPIDH
SAYETVTTLEALQVWIDAAFEAGFVAVDTETTSLDTMQAEIVGISLATEPGKACYIPLGH
VDGEGDLLGGGGLVEGQIPRDEALKALKPLLEAPSVLKIAQNLKYDWVIFKRLGVEVAPY
DDTMLLSYALDAGKGGNGMDALSERWLGHVPIKYAEVAGKGKTLVTFDKVSIEKASAYAA
EDADVTLRLWLILKPRLPGEQIATVYETLERPMVPVLARMEMRGITVDRQMLSRLSGELA
QGAAALEAEIHELAGKPFNVGSPKQLGDILFGEMGLPGGKKTKTGAWSTSASVLDDLAAE
GHELPSRIVEWRQLSKLKSTYTDALPGYINAETGRVHTSYALAATTTGRLSSSEPNLQNI
PVRTEAGRKIRKAFIAPQGFKLLSADYSQIELRVLAHMAEIPQLVQAFADGLDIHAMTAS
EMFGVPIEGMDPMIRRRAKAINFGIIYGISAFGLANQLGISRGEAGDYIKKYFERFPGIR
DFMEETKSFVHANGYVKTIFGRKAHYPDVNTKNPNMRAFYERAAINAPIQGSAADILRRA
MVRMEDALKAAKLDAKMLLQVHDELIFEVPEDQADATIPVVSRTMEDAPHPALSMRVPLQ
VDARAADTWDEAH
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgtccagcgaatccaagatctcccgtcccctcgcccctggcgaccatgtgtttctggtc
gacggctcgtcgtatattttccgcgcctaccacgcgctgccgccgctgacgcgcaagtcg
gacgggctgccggtgggcgccgtcgcgggtttctgcaacatgctgtggaagctgctgcgc
gaggccgatgaaacagcggcgggcgtcacgccgacgcacatcgcggtgatcttcgatcat
tcggcgaaaaccttccgcaacgagatctacgaccagtacaaggcccagcggcccgacgtg
cccgaggacctgcggccgcaattctccatcattcgcgacgctgtgcgcgccttcaacgtg
gcgagcatcgagcaggaaggctttgaggccgacgacctgatcgccacctacacccgccag
gcggtggaagcgggcgccgacgtcaccatcatctcgtcggacaaggatctgatgcagttg
atccaacccggcgtcgccatggtcgacaccatgaagaacaagcgcattgaggcgccggag
gttcaggagaaattcggcgtcgcgccggacaaggtggtggacgttcaggcgttggcgggc
gacagcgtggacaacgtgcccggcgtgcccgggatcggggtgaagaccgctgcccagctg
atcaacgaatacggcgatctggagaacctcctcgcgcacgcctccgagatcaagcagacc
aagcggcgcgaaaacctcatcgaattcgccgaacaggcgcgaatctcccgccgtctggtg
gagctcgaccagaacatgccggtggacgtggcgcttgccgacagcgcggtacagccgctc
gacggcgagaaggcggtcgccttcctcaaggcgatggaattcaccacgctgacccgccgc
gtggcggaactcagcgagaccagcgccgaggacatcgaggccaccgaggtcgcgatcaag
ggctgggaaagcccgacgccggtggccagctccgcaacgtccggcgacagtggcgaggcg
acgccttccgcgcttgccgagcgccgggcagcaaacatcggcgcgctgccgatcgaccat
tccgcttacgagaccgtcaccacgctggaggcgctgcaggtctggatcgacgcagccttc
gaggccggcttcgtggcggtcgacacggaaaccacttcgctcgacaccatgcaggcggag
atcgtcggaatctcgctggcgaccgagccgggcaaggcctgctacatcccgctcggccat
gtcgacggcgagggcgacctgttgggcggcggcgggctggtcgagggccaaattccgcgc
gatgaggcactaaaggcgctcaagccgctgctcgaggccccaagcgttctcaagatcgcg
cagaacctgaaatacgactgggtgatcttcaagcggctcggcgtggaggtcgcgccctac
gacgacaccatgctgctgtcctatgcgctggatgccggcaagggcggcaacggcatggac
gcgctttccgagcgctggctcggccacgtgccgatcaaatacgcggaggtcgccggcaag
ggcaagacgctggtcaccttcgacaaggtctccatcgagaaggcctcggcctatgcggcg
gaggacgcagacgtcacgctgcggctgtggctgatcctcaaaccgcgcctgccgggcgaa
cagatcgccaccgtctacgagacgctggagcggccgatggtgccggtgctggcgcgcatg
gaaatgcgcggcatcaccgtggaccggcagatgctgtcgcggctctcgggcgagctggcg
cagggcgccgccgcgctggaagccgaaatccacgaactggccggcaagccgttcaatgtc
ggctcgccgaagcagctcggcgacatcctgttcggtgaaatgggcctgcccggcggcaag
aagaccaagaccggcgcctggtcgacctcggcctccgtgctcgacgacctggcggccgaa
ggccacgagctgccctcgcggattgtcgaatggcggcagctctcgaagctgaaatcgacc
tacaccgacgcgctgcccggctacatcaacgccgagaccggccgcgtgcacacctcctat
gcgctggcggcgaccacgaccgggcggctgtcctcgtccgagcccaacctgcagaacatt
ccggtgcgcaccgaggccggccgcaagatccgcaaggccttcatcgcgccgcagggtttc
aagctgctgtcggccgactacagccagatcgagctgcgcgttctcgctcacatggcggag
attccgcagctcgtgcaggccttcgccgacgggctcgacatccatgcgatgaccgcgagc
gagatgttcggcgtgcccatcgagggcatggacccgatgatccgccgccgcgccaaggca
atcaatttcggcatcatctacggcatctccgccttcggcctcgccaaccagctcggcatc
tcgcgcggcgaggcgggcgattacatcaagaagtatttcgagcgtttccccggcatccgc
gacttcatggaggagacgaaatccttcgtgcacgccaacggctacgtgaagacgatcttt
ggccgcaaggcgcattatcccgacgtcaacaccaagaaccccaacatgcgcgcgttttac
gaacgcgcggcgatcaacgcgccgatccagggctccgccgccgatattctccggcgagcc
atggtgcgcatggaggacgcgctgaaggcggcgaagcttgacgccaagatgctgctgcag
gtgcacgacgagctgatcttcgaggtgcccgaggatcaggcggacgccacgattccggtc
gtctcccgcaccatggaggacgcgccccaccccgcgctttccatgcgcgtgccgctgcag
gtcgacgcccgcgccgccgacacctgggacgaggcgcactag

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