Breoghania sp. L-A4: D1F64_01155
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Entry
D1F64_01155 CDS
T05594
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brn
Breoghania sp. L-A4
Pathway
brn03030
DNA replication
brn03410
Base excision repair
brn03420
Nucleotide excision repair
brn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1F64_01155
03410 Base excision repair
D1F64_01155
03420 Nucleotide excision repair
D1F64_01155
03440 Homologous recombination
D1F64_01155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brn03032
]
D1F64_01155
03400 DNA repair and recombination proteins [BR:
brn03400
]
D1F64_01155
Enzymes [BR:
brn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1F64_01155
DNA replication proteins [BR:
brn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D1F64_01155
DNA repair and recombination proteins [BR:
brn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D1F64_01155
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1F64_01155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Taq-exonuc
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AXS38925
UniProt:
A0A346QXG6
LinkDB
All DBs
Position
complement(235759..238680)
Genome browser
AA seq
973 aa
AA seq
DB search
MSSESKISRPLAPGDHVFLVDGSSYIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWKLLR
EADETAAGVTPTHIAVIFDHSAKTFRNEIYDQYKAQRPDVPEDLRPQFSIIRDAVRAFNV
ASIEQEGFEADDLIATYTRQAVEAGADVTIISSDKDLMQLIQPGVAMVDTMKNKRIEAPE
VQEKFGVAPDKVVDVQALAGDSVDNVPGVPGIGVKTAAQLINEYGDLENLLAHASEIKQT
KRRENLIEFAEQARISRRLVELDQNMPVDVALADSAVQPLDGEKAVAFLKAMEFTTLTRR
VAELSETSAEDIEATEVAIKGWESPTPVASSATSGDSGEATPSALAERRAANIGALPIDH
SAYETVTTLEALQVWIDAAFEAGFVAVDTETTSLDTMQAEIVGISLATEPGKACYIPLGH
VDGEGDLLGGGGLVEGQIPRDEALKALKPLLEAPSVLKIAQNLKYDWVIFKRLGVEVAPY
DDTMLLSYALDAGKGGNGMDALSERWLGHVPIKYAEVAGKGKTLVTFDKVSIEKASAYAA
EDADVTLRLWLILKPRLPGEQIATVYETLERPMVPVLARMEMRGITVDRQMLSRLSGELA
QGAAALEAEIHELAGKPFNVGSPKQLGDILFGEMGLPGGKKTKTGAWSTSASVLDDLAAE
GHELPSRIVEWRQLSKLKSTYTDALPGYINAETGRVHTSYALAATTTGRLSSSEPNLQNI
PVRTEAGRKIRKAFIAPQGFKLLSADYSQIELRVLAHMAEIPQLVQAFADGLDIHAMTAS
EMFGVPIEGMDPMIRRRAKAINFGIIYGISAFGLANQLGISRGEAGDYIKKYFERFPGIR
DFMEETKSFVHANGYVKTIFGRKAHYPDVNTKNPNMRAFYERAAINAPIQGSAADILRRA
MVRMEDALKAAKLDAKMLLQVHDELIFEVPEDQADATIPVVSRTMEDAPHPALSMRVPLQ
VDARAADTWDEAH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatccaagatctcccgtcccctcgcccctggcgaccatgtgtttctggtc
gacggctcgtcgtatattttccgcgcctaccacgcgctgccgccgctgacgcgcaagtcg
gacgggctgccggtgggcgccgtcgcgggtttctgcaacatgctgtggaagctgctgcgc
gaggccgatgaaacagcggcgggcgtcacgccgacgcacatcgcggtgatcttcgatcat
tcggcgaaaaccttccgcaacgagatctacgaccagtacaaggcccagcggcccgacgtg
cccgaggacctgcggccgcaattctccatcattcgcgacgctgtgcgcgccttcaacgtg
gcgagcatcgagcaggaaggctttgaggccgacgacctgatcgccacctacacccgccag
gcggtggaagcgggcgccgacgtcaccatcatctcgtcggacaaggatctgatgcagttg
atccaacccggcgtcgccatggtcgacaccatgaagaacaagcgcattgaggcgccggag
gttcaggagaaattcggcgtcgcgccggacaaggtggtggacgttcaggcgttggcgggc
gacagcgtggacaacgtgcccggcgtgcccgggatcggggtgaagaccgctgcccagctg
atcaacgaatacggcgatctggagaacctcctcgcgcacgcctccgagatcaagcagacc
aagcggcgcgaaaacctcatcgaattcgccgaacaggcgcgaatctcccgccgtctggtg
gagctcgaccagaacatgccggtggacgtggcgcttgccgacagcgcggtacagccgctc
gacggcgagaaggcggtcgccttcctcaaggcgatggaattcaccacgctgacccgccgc
gtggcggaactcagcgagaccagcgccgaggacatcgaggccaccgaggtcgcgatcaag
ggctgggaaagcccgacgccggtggccagctccgcaacgtccggcgacagtggcgaggcg
acgccttccgcgcttgccgagcgccgggcagcaaacatcggcgcgctgccgatcgaccat
tccgcttacgagaccgtcaccacgctggaggcgctgcaggtctggatcgacgcagccttc
gaggccggcttcgtggcggtcgacacggaaaccacttcgctcgacaccatgcaggcggag
atcgtcggaatctcgctggcgaccgagccgggcaaggcctgctacatcccgctcggccat
gtcgacggcgagggcgacctgttgggcggcggcgggctggtcgagggccaaattccgcgc
gatgaggcactaaaggcgctcaagccgctgctcgaggccccaagcgttctcaagatcgcg
cagaacctgaaatacgactgggtgatcttcaagcggctcggcgtggaggtcgcgccctac
gacgacaccatgctgctgtcctatgcgctggatgccggcaagggcggcaacggcatggac
gcgctttccgagcgctggctcggccacgtgccgatcaaatacgcggaggtcgccggcaag
ggcaagacgctggtcaccttcgacaaggtctccatcgagaaggcctcggcctatgcggcg
gaggacgcagacgtcacgctgcggctgtggctgatcctcaaaccgcgcctgccgggcgaa
cagatcgccaccgtctacgagacgctggagcggccgatggtgccggtgctggcgcgcatg
gaaatgcgcggcatcaccgtggaccggcagatgctgtcgcggctctcgggcgagctggcg
cagggcgccgccgcgctggaagccgaaatccacgaactggccggcaagccgttcaatgtc
ggctcgccgaagcagctcggcgacatcctgttcggtgaaatgggcctgcccggcggcaag
aagaccaagaccggcgcctggtcgacctcggcctccgtgctcgacgacctggcggccgaa
ggccacgagctgccctcgcggattgtcgaatggcggcagctctcgaagctgaaatcgacc
tacaccgacgcgctgcccggctacatcaacgccgagaccggccgcgtgcacacctcctat
gcgctggcggcgaccacgaccgggcggctgtcctcgtccgagcccaacctgcagaacatt
ccggtgcgcaccgaggccggccgcaagatccgcaaggccttcatcgcgccgcagggtttc
aagctgctgtcggccgactacagccagatcgagctgcgcgttctcgctcacatggcggag
attccgcagctcgtgcaggccttcgccgacgggctcgacatccatgcgatgaccgcgagc
gagatgttcggcgtgcccatcgagggcatggacccgatgatccgccgccgcgccaaggca
atcaatttcggcatcatctacggcatctccgccttcggcctcgccaaccagctcggcatc
tcgcgcggcgaggcgggcgattacatcaagaagtatttcgagcgtttccccggcatccgc
gacttcatggaggagacgaaatccttcgtgcacgccaacggctacgtgaagacgatcttt
ggccgcaaggcgcattatcccgacgtcaacaccaagaaccccaacatgcgcgcgttttac
gaacgcgcggcgatcaacgcgccgatccagggctccgccgccgatattctccggcgagcc
atggtgcgcatggaggacgcgctgaaggcggcgaagcttgacgccaagatgctgctgcag
gtgcacgacgagctgatcttcgaggtgcccgaggatcaggcggacgccacgattccggtc
gtctcccgcaccatggaggacgcgccccaccccgcgctttccatgcgcgtgccgctgcag
gtcgacgcccgcgccgccgacacctgggacgaggcgcactag
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