Breoghania sp. L-A4: D1F64_03230
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Entry
D1F64_03230 CDS
T05594
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brn
Breoghania sp. L-A4
Pathway
brn03420
Nucleotide excision repair
brn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1F64_03230
03430 Mismatch repair
D1F64_03230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brn03400
]
D1F64_03230
Enzymes [BR:
brn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1F64_03230
DNA repair and recombination proteins [BR:
brn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1F64_03230
MMR (mismatch excision repair)
Other MMR factors
D1F64_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
FeoA
Motif
Other DBs
NCBI-ProteinID:
AXS39239
UniProt:
A0A346QYD0
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All DBs
Position
677330..679126
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AA seq
598 aa
AA seq
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MSSVSFNRALYLRAAEDLRPNEKQWQAYESTGHCVLLAGPGSGKTKTLTVKLARLLSEDV
DEPRGIACITYNNECTRELENRLDALGITPGGRVFIGTVHSFSLTQILLPYAKVAGLGLP
DEFTVASRQQTRAALVAAHAKVIGGPENPQDWEMRLGRHRRRFLNRERPEWKTLDPQLSG
LVEAYEAELRALGLIDFDDMPLLAVRALAANKWLRTAMVAKYPILAVDEYQDLGLALHGM
VMGLCFSAGMRLFAVGDVDQSIYGFTGATPELLRRLSEREDVETVRLGLNYRCGSRIVSA
SEYALGEERGYKAPEDAHEGTIYFHPCTGGYAGQARYLIEELIPEIRERRPDIILGEIAV
LYPAAFLGDDVANAAAEYGYSVIRTDGNALYPRGSRLMRWLEQCAMWCCGGWRSGTPRLS
RVVSEGTRLFYEAIADEDKRLAFQRDLTAALWDRRDESLGLYDWLTALRDDIIRSQVDLA
RSLADEYCTLNDFLARIGPVGDVDDFPLAEFAGIGIGLDRINLSTLHSAKGREFDVVILF
GAEEGRLPRNNATENDVREARRLFYVGFTRARHEIHLMYGQHNSSRFVTEVQERLEGE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggtctcgtttaatcgggcgctctatctcagggcggcagaggatctgcgtccc
aacgagaagcagtggcaggcttatgaatcaactgggcattgcgtgctgttggctggtcct
ggcagcggcaagaccaaaacgctcacggtcaagctcgccagattgctcagcgaggatgtg
gacgagccgcgcggtattgcctgtatcacctacaataacgaatgcacgcgcgagctcgaa
aacaggttggacgcgctcggcatcacacccggcggtcgcgtctttatcggaactgtccac
tcattctcactcacacaaattctgctgccctacgccaaggtggccgggctgggcctgccc
gacgaattcacggtagcgagtcggcagcaaactcgagccgccttggtcgccgctcacgcc
aaggtcatcggtgggccggagaacccgcaggactgggagatgcggctcggccgtcatcgg
cgccggttcctcaaccgcgagcggccggaatggaagacgctcgatccgcagctcagtggg
ctcgtcgaagcatatgaggccgaacttcgcgcactcgggctaatcgattttgacgacatg
ccgctcctcgcagtgcgtgcccttgccgcgaacaaatggcttcgaacggcgatggtggcg
aaatatccgatcctcgccgtcgacgagtatcaggacttgggtctcgcgctccacggtatg
gtgatgggcctctgcttcagcgcgggcatgcggttgttcgcggtaggcgatgtcgatcag
tcaatctatggcttcaccggcgcgacgccagagctgctgcggcggctttccgagcgcgag
gacgtcgagacggtgcgactaggtcttaactatcgctgcggatcgcggatcgtcagtgcg
tccgaatatgcgctcggagaggagcggggctacaaggcgcccgaggatgcccatgaaggg
acgatctactttcacccctgcacaggtggctatgccgggcaggcacgatatctcatcgaa
gagctgatcccggaaatccgcgagcgtcggcccgacattattcttggcgagatcgcggtg
ctgtatcctgcggcattcctcggcgatgatgtcgccaacgcggctgcggaatatggctac
tcggtgatacggaccgacggcaacgcgctgtatccgcgcggcagcaggctgatgcgatgg
ctggagcaatgtgccatgtggtgctgcggaggctggcgatcagggacgcctcggctgtct
cgcgtggtgagcgaaggcaccaggcttttttatgaagccatagccgatgaggataagcgg
ctcgctttccagcgcgatctcaccgcagcgttatgggatcggcgggacgagtcgctcggc
ctctatgattggctgacagctctgcgcgatgacattattcgatcgcaggtcgatctcgcc
cgatcgctcgctgacgaatactgcacactgaacgacttcctcgcgcgtatcggtcccgtc
ggcgatgtcgatgattttccgttagccgagttcgccggaatcggcatcggcctcgaccgc
atcaatctttcgacgttgcacagcgccaaggggcgcgaattcgatgtagtgatcctgttt
ggtgcggaggaaggccggttgccgcgcaacaatgctacggagaacgacgtccgcgaagcc
cgacgcctcttctatgtcggcttcacacgcgcgaggcatgaaattcatctcatgtacggg
cagcacaactcgtcgcgcttcgtgacggaagtgcaggagcgcctcgaaggtgaatga
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