Breoghania sp. L-A4: D1F64_09555
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Entry
D1F64_09555 CDS
T05594
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
brn
Breoghania sp. L-A4
Pathway
brn00260
Glycine, serine and threonine metabolism
brn00460
Cyanoamino acid metabolism
brn00630
Glyoxylate and dicarboxylate metabolism
brn00670
One carbon pool by folate
brn00680
Methane metabolism
brn01100
Metabolic pathways
brn01110
Biosynthesis of secondary metabolites
brn01120
Microbial metabolism in diverse environments
brn01200
Carbon metabolism
brn01230
Biosynthesis of amino acids
brn01240
Biosynthesis of cofactors
brn04981
Folate transport and metabolism
Module
brn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
brn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D1F64_09555
09102 Energy metabolism
00680 Methane metabolism
D1F64_09555
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D1F64_09555
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
D1F64_09555
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
D1F64_09555
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
D1F64_09555
Enzymes [BR:
brn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
D1F64_09555
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
PCC
Motif
Other DBs
NCBI-ProteinID:
AXS40262
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All DBs
Position
2060076..2061389
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AA seq
437 aa
AA seq
DB search
MSMTDSSLGAPISPDFFARSLAEADPEVAASIASELSRQRHEIELIASENIVSRAVLEAQ
GSIMTNKYAEGYPGRRYYGGCEFVDVAENLAIERVTKLFGCAFANVQPNSGSQANQSVLL
ALSKPGDTILGMSLDAGGHLTHGARPNLSGKWFNAVQYGLNVETGLIDYDQLEALAREHK
PAVIIAGGSAYSRVIDFAKFRAIADEVGAYLHVDMAHFAGLVAAGVHPSPFPHAHVVTST
THKTLRGPRGGLVLTNDETIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALRPDFKVYA
KAVAENAKVLAQTLVEGGLDIVSGGTDTHLMLVDLRPKELTGKSAEASLGRANITCNKNG
VPNDPQKPTITSGIRLGTPAATTRGFGAAEFREVGLLITEVLDGLKTANSEDANQAVEAA
VRAKVVALTSRFPIYES
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacagacagttcgctcggcgcgccgatcagccctgattttttcgcccgctcg
ctcgccgaagcggatcccgaggtggccgcctcgatcgcctcggagctgtcgcgtcagcgg
catgagatcgagttgatcgcctcggagaacatcgtctcgcgcgccgttctcgaggcgcag
ggctcgatcatgaccaacaagtatgccgagggctatccgggccgtcgctattatggcggt
tgcgagtttgtcgacgtcgcggaaaacctcgccatcgagcgcgtcacgaagctgttcggc
tgcgccttcgccaatgtgcagcccaattccggcagccaggccaaccagtcggtgctgctg
gcgctgtccaagccgggcgacacgattctcggcatgagcctggacgccggcggtcacctg
acccacggcgcaaggccgaacctgtctggcaagtggttcaacgccgtgcagtacggtctc
aatgtggaaaccggcctgatcgactacgaccagctcgaagccctggcgcgcgagcacaag
cccgcggtgatcatcgccggcggctcggcctattcgcgcgtcatcgacttcgcgaagttc
cgcgcgatcgccgatgaagtcggcgcctatctgcatgtcgacatggcgcatttcgccggt
ctcgtggcggccggcgtgcacccgagcccgttcccgcacgcccatgtggtcacctcgacg
acccacaagaccctgcgcggtccgcgcggcggtctcgtgctgaccaacgacgagacgatc
gccaagaagatcaattcggcggtgttcccgggcctgcagggcggtccgctcatgcatgtg
atcgccggcaaggcggtggccttcggcgaggcgctgcgcccggacttcaaggtctatgcg
aaggcggttgccgagaacgccaaggtcctggcgcagacgctggtggaaggcggtctcgac
atcgtctccggcggcaccgacacccatctgatgctggtcgatctgcgtcccaaggaactg
acgggcaagtcggccgaggcctcgctgggtcgcgccaacatcacctgcaacaagaatggc
gttcccaacgatccgcagaagccgacgatcacctcgggcatccgtctcggcaccccggcc
gccacgacgcgcggctttggcgcggcggaattccgcgaagtcgggctgctgatcaccgaa
gtgctggacggcctgaagacggccaacagcgaagacgccaatcaggcggtggaagccgcg
gtgcgcgccaaggtggtggcgctgaccagccgcttcccgatctacgaaagctag
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