Breoghania sp. L-A4: D1F64_16460
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Entry
D1F64_16460 CDS
T05594
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brn
Breoghania sp. L-A4
Pathway
brn03420
Nucleotide excision repair
brn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1F64_16460
03430 Mismatch repair
D1F64_16460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brn03400
]
D1F64_16460
Enzymes [BR:
brn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1F64_16460
DNA repair and recombination proteins [BR:
brn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1F64_16460
MMR (mismatch excision repair)
Other MMR factors
D1F64_16460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AXS41324
LinkDB
All DBs
Position
complement(3597158..3599608)
Genome browser
AA seq
816 aa
AA seq
DB search
MTDPNGYSDDDLDDWGVGAPQPVSGSVQAHGSTPGQDAPAGGGIAARALAARSQRAPDYL
NGLNPEQGRAVETIDGPVLVLAGAGTGKTRVLTTRIAHILATERAYPGQILSVTFTNKAA
REMKERIAALVGPTAEGMTWLGTFHSIGVKILRRHAELVGLRPDFTILDTDDQLRLIKQL
IKAEGLDDKRWPARQFAQVMDGWKNRGLAPSEVPEGERRSFGNGTAGKLYEDYQERLRIL
NAADFGDLLLHCIRLFREHPDVLKGFQDRFRYMLVDEYQDTNVAQYLWLRLLAQGNRNIC
CVGDDDQSIYGWRGAEVDNILRFEHDFPGAVVIRLERNYRSTPHILAAASHLIAKNEGRL
GKTLFTDSKDPDAERVSVASVWDSEEEARAIGEDIEQLQRDGHALNDMAILVRASFQMRE
FEDRFITLGLNYRVIGGPRFYERMEIRDALAYFRAMLQPSDDLAFERIVNTPKRGLGEAT
LGLVHGLARAKGIPLMQAAAELVQTEELRAKARGVLQGVLSDFARWRGQLETLKHTDLAE
IILDESGYTEMWRNDRSADAPGRLDNLKELIRSMDDFESMQGFLEHIALVMDRDSSDAHD
AVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDESGRSGLEEERRLAYVGITRAKKRA
KIWFATNRRIHGLWQSSLPSRFLDELPEDHVEIMESSTSYGGMGGGYGASRFDNRDPFQS
GSYETPGWQRAQRNRAKSGGFADSGAKYGGYGGKTIEGELIAKSVTDAKSDYSTGERVFH
LKFGYGTISGIDGNKLTIEFEKAGQKRVLDSFVEKP
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccgaacgggtattccgacgacgatttggatgattggggcgtcggagcgcca
cagcctgtgtccggatccgtgcaagcacacggctcaacgcccgggcaggacgctccggcc
ggcggcggcattgcggcgcgggcgctcgccgcgcggtcccagcgcgcgccggattatctc
aatggcctcaaccccgagcagggccgggcggtggaaaccatcgacgggccggttctggtg
ctggcgggcgccggcaccggcaagactcgcgttctgaccacccgcatcgcgcatattctg
gcgaccgagcgcgcctatccgggccagattctgtccgtcaccttcaccaacaaggcggcg
cgcgagatgaaggagcgcatcgcggcgctggtcggccccacggccgagggcatgacctgg
ctcggtaccttccattccatcggcgtgaagatcctgcgccggcatgcggagctggtcggc
ctgcggcccgatttcaccattctcgacaccgacgaccagttgcggctgatcaagcagttg
atcaaggcggaggggctggacgacaagcgctggccggcgcggcagttcgcgcaagtcatg
gacggctggaagaaccgcggcctcgcgccatccgaggtgcccgagggcgaacggcgctcc
ttcggcaacggcacggccggaaaactctacgaggactatcaggagcggctgcggatcctc
aacgccgccgatttcggcgatctgctgctgcattgcatccggctgtttcgcgaacacccg
gacgtgctcaagggcttccaggaccgcttccgctacatgctggtggacgagtatcaggac
accaacgtcgcccagtatctttggctgcggctgctggcgcagggcaaccgcaacatctgc
tgcgtgggcgacgacgaccagtcgatttacggctggcgcggcgccgaggtcgacaacatc
ctgcgcttcgagcacgattttcccggcgcggtggtcatccggctggagcgcaactaccgt
tccacgccgcatatcctcgccgccgcctcgcacctgatcgccaagaacgaggggcgtttg
ggcaagacactgttcaccgacagcaaggatcccgacgccgagcgcgtatccgtggcctcc
gtctgggattcggaagaagaagcgcgcgcgatcggcgaggacatcgagcagttgcagcgc
gatggccacgcgctcaacgacatggcgattctggtgcgcgcgtccttccagatgcgcgag
ttcgaggaccgcttcatcaccctgggtctgaactaccgcgtcatcggcggcccgcgcttc
tatgagcgcatggagatccgcgacgctctcgcctatttccgcgccatgctgcagccgtcg
gacgatctggcattcgagcgcatcgtcaacacgcccaagcggggccttggcgaagcgacg
ctggggctggtgcacgggctggcgcgcgccaagggcattcccctgatgcaggcggcggcg
gagctggtccagaccgaggagctgcgcgccaaggcgcgcggcgttctgcagggcgtgctg
agcgatttcgcccgctggcgcggccagctcgagacgctcaagcacacggatctcgcggaa
atcattctcgacgagagcggctacaccgagatgtggcgcaacgaccgctcggcggatgcg
ccggggcggctggacaacctcaaggaactcatccgctccatggacgacttcgagtccatg
caggggttcctggagcacattgcgctggtgatggaccgcgattccagcgacgcccacgac
gccgtctccatcatgacgctgcattcggccaaggggctggagttcgacacggtgtttctt
cccggttgggaggaggggctgtttccgcatcagcgcgcgctcgatgaatccggccgctca
gggctcgaggaggagcgccggctggcctacgtgggcatcacacgggccaagaagcgcgcg
aaaatctggttcgccactaaccgccgtattcacgggctgtggcagtcgagcctgccgtcg
cggttcctcgacgaactgccggaggaccatgtggagatcatggaatcgtcgacctcctac
ggcggcatgggcggcggctatggcgccagccggttcgacaatcgcgatcccttccagagc
ggcagctatgagacccctggctggcagcgcgcccagcgcaaccgcgccaagtccggcggc
tttgccgacagcggcgcgaaatacggcggctacggcggcaagacgatcgagggcgagctg
atcgccaagagcgtcacggacgccaagtcggactattcgacgggcgagcgcgtgttccac
ctgaaattcggctacggcacgatttccggcatcgacggcaacaagctgacgatcgaattc
gaaaaagccggccagaaacgcgtgctcgacagctttgtcgagaagccgtga
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