Breoghania sp. L-A4: D1F64_21375
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Entry
D1F64_21375 CDS
T05594
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
brn
Breoghania sp. L-A4
Brite
KEGG Orthology (KO) [BR:
brn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brn03016
]
D1F64_21375 (thpR)
Enzymes [BR:
brn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
D1F64_21375 (thpR)
Transfer RNA biogenesis [BR:
brn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
D1F64_21375 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
zf-CDGSH
Motif
Other DBs
NCBI-ProteinID:
AXS42084
UniProt:
A0A346R6H5
LinkDB
All DBs
Position
complement(4678431..4678967)
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AA seq
178 aa
AA seq
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MPRLFTGLEMPAETAMMLSSLRGGLRNARWIDPENYHITLRFIGDIDDRTADEVAFALGR
INRTPFEIRLGGLAAFGNKKPHSIYAAVAPNPQLAELQAEQERIIQRLGLPAERRKFIPH
VTICRCKGSATADVARWLAMRGGFSAQPFIAGRFVLYSSKASTGGGPYLIEEAYPLAA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcttgttcaccggtctggaaatgccagccgagacggctatgatgctgtcgtcg
ctgcgcggcggtctgcgcaacgcgcgctggatcgatccggaaaactatcacatcacattg
cgcttcatcggcgacatcgacgaccgaacggccgatgaggtcgccttcgcgctgggccgc
atcaaccgcacgccgttcgaaatccggctgggcgggctggcggctttcggcaacaagaag
ccgcattcgatctatgccgccgtggcgcccaatccgcagctcgccgaactgcaggccgag
caggagcggatcatccagcggctgggcttgccggcggagcggcgcaagttcatcccgcat
gtgacgatctgccggtgcaagggcagcgccaccgccgacgtggcgcgctggctggcgatg
cgcggcggcttctcggcccagccgttcatcgccgggcgcttcgtgctgtattcgtcgaag
gcgtcgaccggcggcggtccctatctcatcgaggaagcctaccctctggcggcatga
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