Bradyrhizobium sp. ORS 285: BRAD285_0836
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Entry
BRAD285_0836 CDS
T04956
Symbol
rpoH
Name
(GenBank) sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins
KO
K03089
RNA polymerase sigma-32 factor
Organism
bro
Bradyrhizobium sp. ORS 285
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bro03021
]
BRAD285_0836 (rpoH)
Transcription machinery [BR:
bro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BRAD285_0836 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
KORA
Sigma70_r4_2
HTH_3
HTH_7
GntR
HTH_28
HTH_Crp_2
GP3_package
HTH_23
HTH_20
Motif
Other DBs
NCBI-ProteinID:
SMX56100
UniProt:
A0A1Y6KDI9
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Position
complement(829070..829969)
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AA seq
299 aa
AA seq
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MARTATLPVLNGESGLARYLSEIRKFPMLEPQEEYMLAKRWREHDDSDAAHKLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLRPDQVKLIAKRLGVTDQDVIDMNRRL
GGDASLNAPIRDDGEAGEWQDWLVDTSPNQEAIMAEHEEYDHRRQALNGAIGVLNARERR
IFEARRLADEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQSAVKGTIAKQEAAALEAAH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtacagctacactaccggttctcaacggagaatccggccttgctcgctacctc
tccgagatccgcaagttcccgatgctggaaccgcaggaggagtacatgctcgccaagcgt
tggcgcgagcatgacgacagcgacgcagcacataaactcgtgaccagccacctcaggctc
gtggccaagatcgccatgggctatcgcggctacggcctgccgatatccgaagtcgtgtcg
gaaggcaatgtcggcctgatgcaggcggtgaagaggttcgagcccgagaagggcttccgc
ctcgccacatacgccatgtggtggatcaaggcgtcgatacaagagtacatcctgcgttcg
tggtcgctcgtgaagatgggcaccaccgcgaaccagaagaagctgttcttcaacctgcgc
aaggcgaagagcaagatctcggcgctggatgaaggtgatctgcgtccggaccaggtcaag
ctgatcgcgaagcgcctcggcgtgaccgatcaggacgtgatcgacatgaaccgccgcctc
ggtggcgacgcctcgctgaacgcgccgatccgcgacgacggcgaagcgggcgaatggcag
gactggctggtcgacacctcgcccaaccaggaagccatcatggccgagcatgaggagtac
gaccaccgccggcaggcgctgaacggcgcgatcggcgtgctgaatgcgcgcgagcgccgc
atcttcgaggcgcggcgcctggccgacgagccgatgacgctcgaggacctcgccgccgag
ttcggcgtgtcgcgcgagcgcgtgcgccagatcgaggtgcgcgcgttcgagaaggtgcag
tccgccgtcaagggcaccatcgccaagcaggaggcggccgccctggaggccgcgcactaa
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