Bradyrhizobium sp. ORS 285: BRAD285_2317
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Entry
BRAD285_2317 CDS
T04956
Symbol
speF
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
bro
Bradyrhizobium sp. ORS 285
Pathway
bro00330
Arginine and proline metabolism
bro00480
Glutathione metabolism
bro01100
Metabolic pathways
bro01110
Biosynthesis of secondary metabolites
bro04148
Efferocytosis
Module
bro_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BRAD285_2317 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
BRAD285_2317 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
BRAD285_2317 (speF)
Enzymes [BR:
bro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
BRAD285_2317 (speF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Peptidase_S30
Motif
Other DBs
NCBI-ProteinID:
SMX57436
UniProt:
A0A1Y6KCZ8
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Position
complement(2239228..2241585)
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AA seq
785 aa
AA seq
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MDYFRRFTFLFAAPVFETDDLAGVRFNQIIEEIQRSGFEVVRARKLEDAEIAVQTDAAIG
CMVVDWGKKGLEGKTASLINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPAFIAKNLISRLKQYAETLKTPFFGTLVDYAEEGNQLWTCPGHNGGVFYSRSPIGRIFV
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALRAQKEAAQIFGAEKTYFVLNGTSTSNKVVL
GSLVTDGDLVLFDRNNHKAAHHGALLISGGVPIYVSTVRNAWGLIGPMRWDLLEEEHLRQ
QIRDNPLVKDPDAWRKQRPFRVAVVEQCTYDGTIHSAEMILKRIGHLCDYIMFDEAWAGF
MKFHPLYAGRFAMGLSELGPDAPGIIATQSTHKQLASFSQASQIHIKDRHIKGQRRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAMRREF
DEKEKDPARRWFFEPFVPDRVSIPDAASPGGRHDVAWEAISTDQLATDASLWQLAPGEAW
HGFPDLAPGFAMTDPNKLTLLTPGFDRATGGYAEHGIPAPVVAQYLRENRIVAEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKRLHDDNVLLEDAIPEFTRRRFGRYGKVRLRDLCGE
MHRFYREAEVSALQAKQFQPQHLPEIALSPREAARALMRNEVDYLPIDQIAGRIATTPFV
VYPPGIATIVPGERLSERAKPMIDYLKMFERAFNTFPGFDVEIQGLYKEVDESGRIRLHT
YVCAE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggattacttccgccgcttcaccttcctgttcgccgcacccgtcttcgagaccgacgat
ctcgccggcgtccgcttcaatcagatcatcgaggagatccagcgctcgggcttcgaggtc
gtgcgcgcccgcaagctggaggatgccgagatcgcggtgcagacggatgctgcgatcggc
tgcatggtggtggactggggcaagaaggggctggagggcaagacggcgtcgctgatcaac
ctgatgcggcggcgcggcctggacttcccgatcatcctcctcattcgccgcaagcggttc
gaggatctgccggtcgaggtgctcgacttcatcgatggctacgtcttcctctccgaggag
acgccggcgttcatcgccaagaatctgatcagccggctcaagcaatatgccgagacgctc
aagacgccgttcttcggcacgctggtcgactatgccgaggaaggcaaccagctctggacc
tgtcccgggcataatggcggcgtgttctacagccgcagcccgatcggccggatcttcgtc
gagcatctcggcgaggccgtgttccgcgacgacctcgacaattccgtgctcgatctcggc
gacctcctcacccatgagggtccggcgttgcgggcgcagaaggaggcggcgcagatcttc
ggcgccgagaagacctatttcgtgctcaacggcacctcgacctccaacaaggtggtgctg
ggatcgctggtcaccgatggcgacctcgtgctgttcgaccgcaacaaccacaaggccgcg
catcacggcgcgctgctgatttcgggcggcgttccgatctatgtctccacggtccgcaat
gcctggggcctgatcggcccgatgcgctgggatctcctggaagaggagcatctccggcag
cagatccgcgacaatccgctggtcaaggaccccgatgcctggcgcaagcagcggccgttc
cgcgtcgccgtggtcgagcagtgcacctatgacggcaccatccacagcgccgagatgatc
ctcaagcgcatcgggcacctctgcgactacatcatgttcgacgaggcctgggcgggcttc
atgaagttccacccgctctatgccggccgcttcgcgatgggcctgtccgagctcgggccc
gacgcgcctggcatcatcgccacgcaatcgacccacaagcagctcgcgagcttctcgcag
gcgtcacagatccacatcaaggaccgccacatcaagggccagcgccgccgggtcgagcat
cgccgcttcaacgaaagcttcatgcagcacgcctcgacctcgccgttctatccgctgttc
gcctcgctcgacgtcggcgcgcagatgatgaagggccgctcgggcgaggtgctgtgggac
gacacgatccgactcggcatcgaattgcgcaagaagatccgggcgatgcgccgggagttc
gacgagaaggagaaggatccggcgcggcgctggttcttcgagccgttcgtgcccgaccgg
gtctcgatccccgatgcagcgagccccggtggccgccacgacgtcgcctgggaggcgatc
tcgacagaccagctcgcgaccgatgcctcgctctggcagctcgcgccgggcgaggcctgg
cacggctttccggatctcgcccccggcttcgccatgaccgatccgaacaagctcaccctg
ctcacccccggcttcgaccgcgccaccggcggctatgccgagcacggcatcccggcgccg
gtcgttgcgcaatatctgcgcgagaaccggatcgtcgccgaaaagaatgacctcaactcg
ctgcttttcctgctgacgccgggtgtcgaggccagcaaggccggcaccttgatcagcgga
ctcgtcgccttcaagcggctgcatgacgacaacgtgctgctcgaggacgccatccccgag
ttcacccgccgccgcttcggccgctacggcaaggtgcggctgcgcgacctctgcggcgag
atgcaccgcttctaccgcgaggccgaggtgagcgcattgcaggcaaaacaattccagccg
cagcatctaccggagatcgcactgtcgccgcgcgaagcggcgcgggcgctgatgcgcaac
gaggtcgactacctgccgatcgaccagatcgccggccggatcgcgaccacgcccttcgtg
gtctacccgccgggcatcgccaccatcgtgccgggcgagcggctgtccgagcgcgccaag
ccgatgatcgattacctcaagatgttcgagcgcgccttcaacacgttcccgggtttcgac
gtcgagattcagggactgtataaggaggtcgacgagtccggccggatccggctccatacc
tatgtctgcgcagagtaa
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