Bradyrhizobium sp. ORS 285: BRAD285_3295
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Entry
BRAD285_3295 CDS
T04956
Symbol
lpD
Name
(GenBank) Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bro
Bradyrhizobium sp. ORS 285
Pathway
bro00010
Glycolysis / Gluconeogenesis
bro00020
Citrate cycle (TCA cycle)
bro00260
Glycine, serine and threonine metabolism
bro00280
Valine, leucine and isoleucine degradation
bro00310
Lysine degradation
bro00380
Tryptophan metabolism
bro00620
Pyruvate metabolism
bro00630
Glyoxylate and dicarboxylate metabolism
bro00640
Propanoate metabolism
bro00670
One carbon pool by folate
bro00785
Lipoic acid metabolism
bro01100
Metabolic pathways
bro01110
Biosynthesis of secondary metabolites
bro01120
Microbial metabolism in diverse environments
bro01200
Carbon metabolism
bro01210
2-Oxocarboxylic acid metabolism
bro01240
Biosynthesis of cofactors
Module
bro_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bro_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bro_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bro_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BRAD285_3295 (lpD)
00020 Citrate cycle (TCA cycle)
BRAD285_3295 (lpD)
00620 Pyruvate metabolism
BRAD285_3295 (lpD)
00630 Glyoxylate and dicarboxylate metabolism
BRAD285_3295 (lpD)
00640 Propanoate metabolism
BRAD285_3295 (lpD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BRAD285_3295 (lpD)
00280 Valine, leucine and isoleucine degradation
BRAD285_3295 (lpD)
00310 Lysine degradation
BRAD285_3295 (lpD)
00380 Tryptophan metabolism
BRAD285_3295 (lpD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BRAD285_3295 (lpD)
00670 One carbon pool by folate
BRAD285_3295 (lpD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bro04147
]
BRAD285_3295 (lpD)
Enzymes [BR:
bro01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BRAD285_3295 (lpD)
Exosome [BR:
bro04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BRAD285_3295 (lpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
NAD_binding_8
FAD_oxidored
HI0933_like
GIDA
FAD_binding_3
DAO
Lys_Orn_oxgnase
Thi4
2-Hacid_dh_C
Amino_oxidase
AlaDh_PNT_C
3HCDH_N
GMC_oxred_N
PT-TG
Motif
Other DBs
NCBI-ProteinID:
SMX58295
UniProt:
A0A1Y6KF16
LinkDB
All DBs
Position
3253799..3255220
Genome browser
AA seq
473 aa
AA seq
DB search
MADTSFDVIIIGSGPGGYVTAIRAAQLGFKTAIIEKTHLGGICLNWGCIPTKALLRSAEI
YHYMQHAKDYGLSAEKISYDPKAVVQRSRGVSKRLADGVGFLMKKNKVQVIWGRANIDAP
GKITVTKSDVEAPKGALGEGTYQAKHIIVATGARPRVLPGIEPDKKLVWTYFEAMVPDKM
PKSLLVVGSGAIGIEFASFFRTMGSEVTVVEVLPQILPVEDAEIAGIARKQLEKQGLKIM
TGAKVTKLDKKSDSVVATIDDGKGKIETTEFDRVISAVGVVGNIENLGLEKLGVKTDRGC
IVIDGYGKTNVPGLYAIGDVAGPPMLAHKAEHEGVVCIEAIKGLHPHPMDKSLIPGCTYC
HPQVASVGLTEAKAKEQGRDIRVGRFPFVGNGKAIALGEDQGLVKVIFDKKTGQLIGAHM
VGAEVTELIQGYVVAMNLETTEEELMHTIFPHPTLSEMMKEAVLDAYGRVLNM
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacatccttcgacgtcatcatcatcggctccggcccgggcggctacgtcacc
gcgatccgcgccgcccagctcggcttcaagaccgcgatcatcgagaagacgcatctcggc
ggcatctgcttgaactggggctgcatcccgaccaaggcgctcttacgctcggccgagatc
tatcactacatgcagcatgccaaggattatggcctgtcggcggagaagatctcctacgat
ccgaaggcggtggtgcagcgctcgcgcggcgtctccaagcgacttgccgacggcgtcggc
ttcctgatgaagaagaacaaggtgcaggtgatctggggccgcgccaacatcgacgcgccc
ggcaagatcaccgtgacgaagtccgacgtcgaggcgccgaagggcgcgctgggcgagggc
acctaccaggccaagcacatcatcgtcgccaccggcgcgcggccgcgcgtgctgccgggg
atcgagccggacaagaagctggtctggacctatttcgaggcgatggtgccggacaagatg
ccgaagtcgctgctcgtggtcggctccggcgcgatcggcatcgagttcgcctcgttcttc
cgcaccatgggctccgaggtcacggtggtcgaggtgctgccgcagatcctccccgtcgag
gacgccgagatcgccggcatcgcccgcaagcagctggagaagcagggcttgaagatcatg
accggcgccaaggtcaccaagctcgacaagaagagcgacagcgtggtggcgacgatcgac
gacggcaagggcaagatcgagacgaccgagttcgaccgcgtgatctcggcggtcggcgtc
gtcggtaacatcgagaatctcggcctggaaaagctcggcgtgaagaccgaccgcggctgc
atcgtgatcgacggctacggcaagaccaacgtgcccggcctctacgcgatcggcgacgtc
gcaggtcccccgatgctggcgcacaaggccgagcatgagggcgtggtctgcatcgaggcg
atcaagggcctgcatccgcatccgatggacaagagcctcattccgggctgcacctattgc
cacccacaggtcgcctccgtcggcctcacagaagccaaggcgaaagagcagggccgcgac
atccgtgtcggccgctttcccttcgtcggcaacggcaaggcgatcgcgctcggcgaggac
cagggcctcgtcaaagtgatcttcgacaagaagaccggacagctgatcggcgcgcacatg
gtcggcgccgaggtcaccgagctgatccagggctatgtcgtcgcgatgaacctcgagacg
accgaggaagagctgatgcacaccatcttcccgcatccgaccctgtcggagatgatgaag
gaagccgtgctcgacgcctatggtcgtgtgttgaacatgtag
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