Bradyrhizobium sp. ORS 285: BRAD285_3583
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Entry
BRAD285_3583 CDS
T04956
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bro
Bradyrhizobium sp. ORS 285
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bro03009
]
BRAD285_3583 (rimO)
Enzymes [BR:
bro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BRAD285_3583 (rimO)
Ribosome biogenesis [BR:
bro03009
]
Prokaryotic type
ribosomal protein modification factors
BRAD285_3583 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
NTPase_1
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
SMX58556
UniProt:
A0A1Y6KG52
LinkDB
All DBs
Position
3566208..3567533
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AA seq
441 aa
AA seq
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MQQGSAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADLVIVNTCGFLDSAKQ
ESLSAIGSAMAENGKVIVTGCMGAEPEQIEQAYPGVLSITGPQQYESVLDAVHRASPPVH
NPHLDLVPPQGIKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAADVLREAERLV
AAGVKELLVISQDTSAYGLDIKYAESPWKERNVRARFLDLARELGELGAWVRLHYVYPYP
HVDEVIGLMAEGKVLPYLDIPFQHASPNVLKAMRRPAAQDKTLDRIKGWRAVCPDLALRS
TFIVGFPGETDEDFAYLLDWLDEAEIDRLGCFKYEPVAGATSNALPGQVPDEIKQERWNA
LMARQQKISARRLKRKVGTRQQVIIDEVGPTVAKGRTKADAPEIDGAVYISSRRPLRVGE
IVTAKIERADEYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagggttccgcgcccaagatcagctttgtttcgctcgggtgtccgaaggcgctg
gttgattccgagcgcattatcacgcggctgcgcgccgagggctacgagctcgcccgcaag
catgacggcgccgatctcgtcatcgtcaacacctgcggcttcctcgatagcgccaagcag
gagtcgttgtcggcgatcggctcggccatggccgagaacggcaaggtcatcgtcaccggc
tgcatgggcgccgagccggaacagatcgagcaggcctatcccggcgtgctctcgatcacc
ggtccgcagcagtacgagagcgtgctggacgcggtccaccgggcgtcgccgccggtgcac
aatccgcatttggatctcgttcctccccagggcatcaagctcacgccccgccactacgcc
tatctgaagatttcggagggttgcaataacaggtgcagcttctgcatcattccgaagctg
cgtggcgatctggtgtcgcggccggccgccgacgtgctgcgcgaggccgaacggctggtc
gcggccggcgtcaaggaactgctcgtcatctcgcaggacacctccgcctatgggctggac
atcaaatacgccgaaagcccgtggaaggagcgcaacgtccgcgcccgcttcctcgatctg
gcccgcgaactcggcgagctcggggcgtgggtccggctgcattacgtctacccgtatccg
catgtcgacgaggtcatcggcctcatggccgagggcaaggtgctgccctacctggacatc
ccgttccagcatgccagcccgaacgtgctgaaggcgatgcggcgccccgcggcgcaggac
aagacgctggaccgtatcaagggctggcgcgcggtgtgtccggatctggccctccgctcg
accttcatcgtcggcttccccggcgagaccgacgaggacttcgcctatttgctggactgg
ctcgatgaggccgagatcgaccggctcggctgcttcaaatacgagcccgtggccggcgcg
acgtccaatgccctgcccggccaggtgccggacgagatcaagcaggagcgctggaacgct
ctgatggcgcgtcagcagaagatttcggcacgtcggctgaagcgcaaggttggaacgcgc
cagcaggtcatcatcgatgaagtcgggccgaccgtcgccaaggggcgcaccaaggcggat
gcgccggagatcgacggagcggtctatatctccagccgccgcccgttgcgggtcggcgaa
atcgtcacggccaagatcgagcgcgccgacgaatacgatctgcacggctcggtggccggg
ttctga
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