Bradyrhizobium sp. ORS 285: BRAD285_4279
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Entry
BRAD285_4279 CDS
T04956
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bro
Bradyrhizobium sp. ORS 285
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bro03032
]
BRAD285_4279 (topA)
03400 DNA repair and recombination proteins [BR:
bro03400
]
BRAD285_4279 (topA)
Enzymes [BR:
bro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BRAD285_4279 (topA)
DNA replication proteins [BR:
bro03032
]
Prokaryotic type
DNA Topoisomerases
BRAD285_4279 (topA)
DNA repair and recombination proteins [BR:
bro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRAD285_4279 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
SMX59160
UniProt:
A0A1Y6KMB2
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All DBs
Position
4210335..4213082
Genome browser
AA seq
915 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPEENFRMIWEVDPKAAG
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVLKEKRALKDQKIERVVFNAITKQAV
SEAMKNPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EMEIEKFVPREYWSLIATLATPRGDTFEARLVGADGKKIQRLDIGTGAEAEDFKNTLNAA
TYTVATVDAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDGSAITQARKVIGEIYGNKYVPDSPRQYQTKAKNAQEAHEAIRPTDLSR
KPADLRKRLDDDQAKLYELIWTRTIASQMESAELERTTVDIVAKAGGRTLELRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPQMSPNDPLKRQNLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILDVLKARGYVKLEKKRLHGEDKGRVVIAFLENFFRRYVEYDFTADLE
EQLDRISNNEIAWQQVLKDFWTGFIGAVDEIKDLRVAQVLDALDEMLGPHIYPPREDGGD
VRQCPTCGTGRLNLKAGKFGAFVGCSNYPECRYTRPLAADSEAAADRMLGQDPDSGLEVA
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTQPSDVDLDLALKLLSLPREIGKHPETG
LPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSKRFGADPGKA
LGDHPSLGPVAVKAGRYGAYVTAGGVNATIPGDKEKDTITLAEAIALIDERAAKGGGKAK
AAKKAAKHAKAAKPKAGGDDDTPKPAKKAVAKKAAAKPKSESTSKARAPVAKAAKTSAKP
ATKATPKKSAGKARG
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcatcgtggagtcgcctgccaaggccaagacgatcaataagtatctgggc
tcctcctatgaggttctggcctcgttcggccatgtccgcgacctccctgcgaagaacggc
tccgtcgatccggaagaaaatttccggatgatctgggaggtcgaccccaaggcggccggc
cgactcaacgacatcgccaagtccctgaaaggcgccgaccgcctgattctcgccaccgac
cctgatcgcgagggcgaggcgatctcttggcacgtgctggaggtgctgaaggagaagcgt
gcgctcaaggatcagaagatcgagcgcgtcgtcttcaacgcgatcacgaagcaggccgtc
tccgaggccatgaagaacccgcgccagatcgacggcgcgctggtcgacgcctacatggcg
cgccgcgccctcgattacctcgtcggctttacgctctcccccgtgttgtggcgcaagctg
ccgggcgcgcgctccgcgggccgcgtgcagtcggtggcgctgcgcctcgtctgcgaccgc
gagatggagatcgagaagttcgtcccgcgcgaatactggtcgctgatcgccaccctcgcg
acgccgcgcggcgacacgttcgaagcgcgcctcgtcggcgccgacggcaagaagatccag
cgactcgacatcggcaccggcgccgaagcggaagacttcaagaacacgctgaacgcggcg
acctacacggtcgcgaccgtcgacgccaagccggcccggcgcaatccgcaggcgcccttc
accacctcgaccctgcagcaggaagcgagccgcaagctcggcttcgcgccggcgcatacg
atgcgcattgcgcagcggctctatgagggcatcgacatcggcggcgagaccaccggtctc
attacttatatgcgtaccgacggcgtgcagatcgacggctcggcaatcacccaggcgcgc
aaggtgatcggcgagatctacggcaacaaatacgtgccggacagcccgcgccagtatcag
accaaggccaagaacgcccaggaagcgcacgaggcgatccgcccgaccgacctgtcgcgc
aagccggccgatctgcgcaagcggctcgatgacgaccaggccaagctctatgagctgatc
tggacccgcacgatcgccagccagatggaatccgccgagctggagcgcaccacggttgac
atcgtcgccaaggcaggcggccgcaccttggagctgcgcgccaccggccaggtcgtcaag
ttcgacggcttcctcgcgctgtaccaggaaggccgcgacgacgaggaggacgaggacagc
cgccgcctgccgcagatgagcccgaacgatccgctcaagcgccagaacctcgcggtcacc
cagcacttcaccgagccgccgccgcgcttctcggaggcctcgctggtcaagcgcatggaa
gaactcggcatcggccggccctccacctacgcctcgatcctcgatgtgctcaaggcgcgc
ggctatgtgaagctggagaagaagcgcctgcacggcgaggacaagggccgcgtcgtcatc
gccttcctggagaacttcttccgccgctatgtcgaatacgatttcacggcggacctggag
gagcagctcgaccgcatctccaacaacgagatcgcctggcagcaggtcctgaaggatttc
tggaccggcttcatcggcgccgtcgacgagatcaaggatctgcgcgtggcgcaggtgctc
gacgcgctcgacgagatgttgggtccgcacatctatccgccgcgcgaggatggtggcgac
gtccggcagtgcccgacctgcggcaccggcaggctgaacttgaaggccggcaaattcggc
gccttcgtcggctgctccaactatccggagtgccgctacacccgcccgctcgccgccgat
agcgaggccgcggccgaccgcatgctcggtcaggatccggactccggcctcgaggtcgct
gtcaaggccggccggttcggaccctacatccagctcggcgagcagaaggattatgccgag
ggcgagaagccgaagcgcgccggcatccccaagggcacgcagccctcggacgtcgatctc
gacctggcgctgaagctgctgtcgctgccgcgtgagatcggcaagcatccggagacgggt
ctgccgatcaccgcggggctcggccgcttcgggccgttcgtcaagcacgacaagacctat
gcgagcctggaagccggcgacgaggtgttcgacatcggcctcaaccgcgcggtcaccctg
attgccgagaaggtcgccaagggcccgagcaagcggttcggtgcggatcccggcaaggcg
ctgggtgatcatccctcgctcggaccggtggccgtgaaggccggccgctacggcgcctat
gtcaccgctggcggcgtcaacgccactatccccggcgacaaggagaaggacacgatcacg
ctcgcggaagcgatcgccctgatcgacgagcgcgccgcgaagggcggcggcaaggcgaag
gcggcaaagaaggctgcgaagcatgccaaggccgccaagccgaaggcgggcggagacgac
gacacaccgaagccggccaagaaggccgtggcgaagaaggccgcggccaagccgaaatca
gagtccaccagcaaggcgcgtgcgccggttgccaaggccgccaagacatcggccaagccc
gcgaccaaggccacgcccaagaagagcgccggcaaggcccgcggatga
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