Bradyrhizobium sp. ORS 285: BRAD285_5587
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Entry
BRAD285_5587 CDS
T04956
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bro
Bradyrhizobium sp. ORS 285
Pathway
bro03420
Nucleotide excision repair
bro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRAD285_5587 (uvrD)
03430 Mismatch repair
BRAD285_5587 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bro03400
]
BRAD285_5587 (uvrD)
Enzymes [BR:
bro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRAD285_5587 (uvrD)
DNA repair and recombination proteins [BR:
bro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRAD285_5587 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BRAD285_5587 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SMX60384
UniProt:
A0A1Y6KLB0
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All DBs
Position
5590596..5593154
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AA seq
852 aa
AA seq
DB search
MTEPNRVSRFPAPDHQPAPGGIAARARAAASGGARYLAGLNPEQREAVETLDGPVLVLAG
AGTGKTRVLTTRIAHILSMGRARPSEILSVTFTNKAAREMKTRLAEMLGQAVEGMPWLGT
FHSISGRILRSHAELVQLKSNFTVLDVDDQIRLLKQLLQAENIDDKRWPARMLAGLIDGW
KNRGLAPSQVPSGEAAVFGNGKGGKLYASYQERLKILNAADFGDLLLESIRLFRENPDVL
RQYQSRFKFILVDEYQDTNVAQYLWLRLLSQAPSGSSLPGSTRQSITSSEEDGSPGLDAA
RRPGDDDRSVTVSGAPPKNICCVGDDDQSIYGWRGAEVDNILRFEHDFPGAKVIRLERNY
RSTGHILAAASHLITHNEGRLGKTLHTEDVEGEKVTVTGAWDSEEEARGIGEEIEELQRK
GEHLNDVAILVRASYQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINSPAD
DLAFERIVNVPKRGLGDATVQLLHDHARKRRIPLFEAARAVVETDELKPKARGSLRGLIL
QFERWRAQREVTPHTELAEIVLDESGYTEMWQKDRSADAAGRLDNLKELVRSMEEFENLH
GFLEHISLVMDREGAADEEAVSLMTLHSAKGLEFDNVFLPGWEEGLFPSQRTLDEQGRAG
LEEERRLAHVGLTRARRRAKIYFATNRRIHGTWTTTIPSRFLDELPSASVEITESKGGSG
WGGAGGYGPSRFDNVESFGSSYSTPGWQRAQARRPGAARGGSEGGFKEEPSPFSGHDPFG
GTFGRNKRGPMTIEGELVAKSTGTTSEFAPDDRVFHQKFGYGHVIKVDGNKLTIAFDKAG
EKHVVDSFVQRA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcccaaccgcgtgagccgttttcctgcgcctgaccaccagcccgctccgggc
ggcatcgctgcgcgcgcccgtgccgccgcgagcggcggcgcgcgttatctcgcgggcctc
aatccggagcagcgcgaagctgtcgagacgctggatggtccggtgctggtgctggccggc
gcgggcaccggcaagacccgcgtgctgacgacgcgcatcgcgcacatcctgagcatgggg
cgggcgcgtccgagcgagattctgtcggtgaccttcaccaacaaggccgcgcgcgagatg
aagacgcggttggccgagatgctcggccaggccgtcgaaggcatgccgtggctcggcacc
ttccactcgatctccgggcgcattttgcgcagccatgccgagctggtgcagctcaaatcc
aacttcaccgtgctcgatgtcgacgaccagatccggctgctcaaacagctgctgcaggcc
gagaacatcgacgacaagcgctggccggcgcgcatgctggcggggctgatcgacggctgg
aagaaccgcggcctggcgccgtcgcaggtgccctccggcgaagccgccgtgttcggcaac
ggcaagggcggcaagctctatgcgagctatcaggagcggctgaagatcctcaacgccgcc
gatttcggcgacctgctgctcgagagcatccggctgtttcgcgagaacccggacgtgctg
cggcagtatcagagccgcttcaagttcattctggtcgacgagtatcaggacaccaacgtc
gcgcaatatctgtggctgcggctgctgtcgcaggcgccctctggctcgtcattgccgggc
tcgacccggcaatccatcacgtcttcggaagaagatggatcaccgggtctcgacgctgcg
cgtcggcccggtgatgacgaccggagcgttactgtctcgggcgctccccccaagaacatc
tgctgcgtcggcgacgacgaccagtcgatctatggctggcgtggcgccgaggtcgacaac
atcctgcgcttcgagcacgattttcccggcgccaaggtcattcgcctggagcgcaactac
cgttcgaccgggcacatcctcgccgccgcctcgcatctgatcacccataacgaaggccgg
ctcggcaagacgctgcacaccgaggacgtcgagggcgaaaaggtcaccgtcaccggcgcc
tgggactcggaagaggaagcgcgcgggatcggcgaggagatcgaggagctgcagcgcaag
ggcgagcatctcaacgacgtcgccatcctggtgcgcgcgtcctaccagatgcgcgagttc
gaagaccgcttcgtcacgctcggcctgccctatcgcgtcatcggcggtccgcgcttctac
gaacgcgccgagattcgcgatgcgctggcttatctgcgcgtcatcaactcgccggccgac
gatctcgccttcgagcgcatcgtcaacgtgccgaagcgcgggctcggcgacgccaccgtg
cagttgctgcacgatcacgcccgcaagcgccgcatcccgctgttcgaggcggcgcgcgcg
gtggtcgagaccgacgagctcaagccgaaggcgcgcggttcgctgcgcggactcatcctg
caattcgaacgctggcgcgcccagcgcgaggtcacgccgcacaccgagctcgccgagatc
gtgctcgacgagagcggctacaccgagatgtggcagaaggaccgctcggccgatgcggcc
ggccgactcgacaatctgaaagagctcgtccgctcgatggaggagttcgagaacctgcac
ggcttcctcgagcacatctcgctggtgatggaccgcgagggcgcggccgacgaagaggcg
gtgtcgctgatgacgctgcactccgccaagggcctggaattcgacaacgtgttcctgccg
ggctgggaggaaggcctgttcccgagccagcggacactcgacgagcagggccgcgccggc
ctagaagaagagcgccgcctcgcccatgtcggcctgacgcgcgcgcggcggcgcgccaag
atctactttgcgaccaaccgtcgcatccacggcacctggaccacgaccatcccgtcgcgg
ttcctggacgagttgccgtccgcgagcgtcgagatcaccgaatccaagggcggctccggc
tggggcggcgccggcggctacggcccgtcgcggttcgacaatgtcgagtcgttcggatcg
agctattcgacgcccggctggcagcgcgcccaggcgcgccgtcccggcgccgcgcgcggt
ggctcggaaggcggcttcaaggaggagccatctccgttctcagggcacgatccgttcggc
ggtaccttcggccgcaacaagcgcgggccgatgacgatcgagggcgagctcgtggcgaaa
tccaccggcaccacgtcggagttcgcgcctgatgatcgcgtgtttcaccagaagttcggc
tatggccacgtcatcaaggtcgacggcaacaagctgaccatcgccttcgacaaggccggc
gagaagcacgtcgtcgacagtttcgtgcagcgggcgtga
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