Bradyrhizobium sp. ORS 285: BRAD285_5627
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Entry
BRAD285_5627 CDS
T04956
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bro
Bradyrhizobium sp. ORS 285
Pathway
bro00470
D-Amino acid metabolism
bro00550
Peptidoglycan biosynthesis
bro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRAD285_5627 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BRAD285_5627 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bro01011
]
BRAD285_5627 (murD)
Enzymes [BR:
bro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BRAD285_5627 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bro01011
]
Precursor biosynthesis
Amino acid ligase
BRAD285_5627 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
KARI_N
2-Hacid_dh_C
AdoHcyase_NAD
Caskin1-CID
Motif
Other DBs
NCBI-ProteinID:
SMX60420
UniProt:
A0A1Y6KR22
LinkDB
All DBs
Position
complement(5635057..5636457)
Genome browser
AA seq
466 aa
AA seq
DB search
MIPVTSFAGKTVAVFGLGGSGLASCHALRAGGAEVIAADDGADRMTEAAKAGFITADLRT
VSWANFAALVLAPGVPLTHPVPHWSVLKARDAGVEVIGDIELFCRERRRHAPDAPFVAIT
GTNGKSTTTALIAHLMRVAGYDTQMGGNIGTAILSLEPPRMGRVHVIEMSSYQIDLTPSL
DPSVGILINVSEDHIDRHGTIENYAAVKERLVAGVQPQGTAIVGVDDGFCRAIADRLDQA
GKRVVRISVKNPLADGLYTEHETIVRSAGGARSEVARLGGIGSLRGQHNAQNAACAAAAA
LAIGVKEDVLQQGLRSFPGLAHRMEQVGRRGNVLFVNDSKGTNADATAHALSSFADIFWI
AGGKPKAGGITSLTGFFPRIRKAYLIGEAAAEFAGTLGDKVPHAMSGTLEVAVAQAAADA
EASGLKEAVVLLSPACASFDQFRNFEIRGTRFRDLAQALPGVTPVV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtcacctcatttgccggcaagaccgtcgccgtgttcgggctcggcggctcc
gggctggcgtcatgccacgcgctgcgcgcgggcggtgccgaagtgatcgcggccgatgac
ggtgccgaccggatgaccgaagcagcaaaggccggcttcatcacggcggacttgcgcact
gtctcctgggccaatttcgccgcgctggtgctggcgccgggcgtgccgctgacccatccc
gtgccgcattggagcgtgctcaaggcgcgcgacgcgggcgtcgaggtcatcggcgacatc
gagctgttctgccgcgagcgcagacgccacgcgccggatgcgccgttcgtcgccatcacc
ggcaccaacggcaagtcgacgacgacggcgctgatcgcgcatctgatgcgggtcgccggc
tacgacacccagatgggcggcaatatcggcaccgcgatcctgtcgctggagccgccgcgg
atgggccgtgtgcacgtcatcgagatgtcgtcctaccagatcgacctcacgccttcactc
gatccgagcgtgggtatcctgatcaatgtgagcgaggaccatatcgaccgccacgggacg
atcgagaactacgcggcggtgaaggagcgactggtggcgggggtgcagccgcagggcacg
gccatcgtcggcgtcgacgacggcttttgccgcgcgattgccgaccggctcgaccaggcc
ggcaagcgcgtcgtgcgcatctcggtgaagaacccgctggccgatgggctctacaccgag
catgagacgatcgtgcgcagcgccggtggcgcgcgcagcgaggtggcgcggctcggtggc
atcggctcgctgcgcgggcagcacaatgcgcagaacgccgcctgcgccgcggccgctgcg
cttgcgatcggcgtgaaggaggacgtgctgcagcagggcctgcgcagcttccccggtctc
gcgcatcgcatggagcaggtcggccgccgcggcaacgttctgttcgtcaacgactccaag
ggcaccaatgccgacgcgacggcgcatgcgctgtcgtccttcgccgacatcttctggatc
gccggcggcaagccgaaggccggcggcatcaccagcctgaccggcttcttcccgcgcatc
cgcaaggcctatcttatcggtgaggcggcggcagagttcgctggtacgctcggcgataag
gtgccgcacgcgatgtccggcacactcgaagtcgcggtcgctcaggccgccgcggacgcg
gaggcgtcaggcttaaaagaggccgtcgtcctgctgtcccccgcctgcgcctccttcgac
cagttccgcaatttcgaaatccgcggcacccgcttccgcgacctggcgcaggcactaccg
ggtgtgacacctgtggtgtga
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