Bradyrhizobium sp. ORS 285: BRAD285_6395
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Entry
BRAD285_6395 CDS
T04956
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bro
Bradyrhizobium sp. ORS 285
Pathway
bro00300
Lysine biosynthesis
bro00470
D-Amino acid metabolism
bro01100
Metabolic pathways
bro01110
Biosynthesis of secondary metabolites
bro01120
Microbial metabolism in diverse environments
bro01230
Biosynthesis of amino acids
Module
bro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BRAD285_6395 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRAD285_6395 (lysA)
Enzymes [BR:
bro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BRAD285_6395 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
SMX61110
UniProt:
A0A1Y6KT25
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All DBs
Position
complement(6425803..6427143)
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AA seq
446 aa
AA seq
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MTSPPISRQFAATITHSQAARGPEPMNHFDYRDGVLHAEAVNLADLAAQIGTPFYCYSTA
TLERHYRVFADAFAGQDVLICYAMKANSNQSVLRTLAKCGAGADVVSGGELKRALAAGIP
SRKIVFSGVGKTEAELRAALAADIHCLNIESEPELDLLARLAVETGHTARISIRVNPDVD
AGTHAKISTGKSENKFGIPLDHARRVYARAAKMPGIKVTGVDVHIGSQITDLGPMETAFR
ILAEFVQTLRADGHDISHVDFGGGLGIPYHMDRAVPPEPAAYAAMVKRISHNLGCTLMFE
PGRMIVGNAGILVARVIYVKHGEAKNFVIIDAAMNDLIRPTLYEAHHDILPVKQAAPNTP
AFVADVVGPVCESGDYLALDRALPEPAPGDLLAIMTAGAYGAVQACTYNTRALVPEVLVK
GNQSAVIRPRIDVEQLIAMDTPAPWL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgacatcccctcccatttcccggcaattcgccgccacaatcactcactcgcaagccgcg
cgcggacccgaacccatgaaccatttcgactaccgcgacggcgtgctgcacgccgaggcc
gtcaatctcgctgatctcgcggcccaaatcggcaccccgttctactgctactccaccgcc
accctggagcggcactaccgcgtgttcgcggacgccttcgccggccaggacgtgctgatc
tgctacgcgatgaaggccaattccaaccagtcggtgctgcgcacgctggccaagtgtggc
gccggcgccgacgtcgtctccggcggcgagctgaagcgcgcgctggccgctggcatcccc
tcgcgcaagatcgtattttcaggcgtcggcaagaccgaggccgagctgcgcgccgcgctc
gcggccgacatccactgcctcaacatcgagtccgagcccgagctcgacctgctggcgcgc
ctggccgtggaaacgggccacaccgcccgcatctccatccgcgtcaatcccgacgtcgat
gccggcacgcacgccaaaatctcgaccggcaagtcggagaacaagttcggcattccgctc
gaccacgcccgccgcgtctacgcccgcgcggcgaagatgccgggcatcaaggtcaccggc
gtcgacgtccatatcggcagccagatcaccgatctcggcccgatggagaccgcgttccgc
atcctcgccgagttcgtgcagaccctgcgcgccgacggccacgacatctcacatgtcgat
ttcggcggcggcctcggcatcccctatcacatggaccgcgccgtgccgccggagcccgcc
gcctacgccgcgatggtcaagcgcatctcgcacaatctcggctgcaccctgatgttcgag
cccggccgcatgatcgtcggcaatgccggcatcctcgtagcccgggtgatctatgtgaag
cacggcgaggccaagaacttcgtcatcatcgacgccgcgatgaacgacctgatccgcccg
acgctttacgaggcgcatcacgacatcttgcccgtgaagcaggcggctccgaacacgccc
gctttcgtagccgacgtcgtcggcccggtctgcgaaagcggcgactacctcgccctcgac
cgcgcgctgcccgagcccgcgcccggcgacctcctcgccatcatgaccgcaggcgcctac
ggcgccgtgcaggcctgcacctacaacacccgcgcgctcgtccccgaggtgctggtcaag
ggcaaccaatccgccgtcatccgcccgcgcatcgacgtcgagcagctgatcgccatggac
acgccggcgccgtggctgtga
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